Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi121g00016 ATGTTTCCTTTACAACGATGCAATGAACTGGCGATCCCCTTATCTAATAGTCTCAACCACCACCCACCAAATCACAATATCTCCCAAGATTTGATTCTTGATGATTGTGATTATGTTGTTGATTTTTCACATAAAAAATTGTGTAGCAGCCGGCCACCAAAGAAATTATTTTATACACCAGCAGATCACACCACAAATCATGATAGTAATCATAATCCTATCAAAGACAATAAGAAGAAAATGATTCATAAGGAGATTGAGAAGCAAAGGAGACAAGAAATGACTACCCTTCATGCTTCCCTTAGATCCCTTCTCCCTCTTGAATTCATCAAGGGAAAACGTTCTATATCTGATCAAATGAATGAGGGAGTGAATTATATAAACCACTTGAAGAAGGATATAAAACAACTAAGTGAAAAAAGGGATGAACTCAAAAAATATTATAATCTTCAAAGCCTCAAAAGCCATGCATCATGTAGTTTCAGTATCAACAAGAATAATACAACTGTGGGAATTGAAATTAGTACAGAGGAAGGGGTACCACTATCTAAGTTGCTGGAACAACTTCTGAAAGAGGGACTTGATGTTGTTAGCTGCTTTTCAATTCAAGTCAACGGCAGATTACTCCACAGTGCGCAGTGTGAGGTTATTGATTCTATGAGTCTAGATCTATCTGAGCTAAGAAGGAAATTTTCCAAAACTAATCCATCATTTAGTTGTTCTTAA 726 0.3595 MFPLQRCNELAIPLSNSLNHHPPNHNISQDLILDDCDYVVDFSHKKLCSSRPPKKLFYTPADHTTNHDSNHNPIKDNKKKMIHKEIEKQRRQEMTTLHASLRSLLPLEFIKGKRSISDQMNEGVNYINHLKKDIKQLSEKRDELKKYYNLQSLKSHASCSFSINKNNTTVGIEISTEEGVPLSKLLEQLLKEGLDVVSCFSIQVNGRLLHSAQCEVIDSMSLDLSELRRKFSKTNPSFSCS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi121g00016 241 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 233 - -
Vivi121g00016 241 Pfam Helix-loop-helix DNA-binding domain 79 131 IPR011598 GO:0046983
Vivi121g00016 241 Coils Coil 127 147 - -
Vivi121g00016 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 150 IPR036638 GO:0046983
Vivi121g00016 241 FunFam Transcription factor bHLH126 70 158 - -
Vivi121g00016 241 Gene3D - 70 158 IPR036638 GO:0046983
Vivi121g00016 241 CDD bHLH_AtORG2_like 79 146 - -
Vivi121g00016 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 130 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi121g00016 83 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 40.361 2.76e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi121g00016 HLH 9.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi121g00016 - - gmx:100775836 261.922