Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi121g00015 ATGGCCGAAGATCAGAAACAGCATAAAATATCAACTACTTTGGTCAATGATGAGAAGAAAATCATTCGTAAGGAAGTTGAGAAACAAAGAAGGATGCAAATGTCTATTCTATGCTCATCACTCAGATCTTCACTTCCTTTTCACCTAATTAAGGGAAAGCGTTCAGTATCAGATCATATAGGTGAGGCTGCAAATTATGTCCAAATTTTGAAGGAAAAGGTTAACGTACTCGAAAAGAAAAGGGATAAGCTCAAGGAAACTATTAGTTCAACCATGATTGAAACTGAAAATGAATTACCAGCAGATCCTTCAAATTTAGTGAAGTGTGTTAACATTAATCAAATTCCAGATGGGGTGGAAATTGTTATATGCCGTGGTTTCGAGGATAGCCCTTCGCGTTTATCAGATTTAATGAAAATAATAGTTCAAGAAGGATGTGATGTTGTTCACTGTGTTACCAACCATGTTAATGGGAAGATATTTCATACTATTAAATCCGAGGTGGAAGACTTGACACACTTTGATCTTGCTAGGCTGCAAAACAAACTGGATCAGGCAATCTTATTGTCAAGGTAG 576 0.3646 MAEDQKQHKISTTLVNDEKKIIRKEVEKQRRMQMSILCSSLRSSLPFHLIKGKRSVSDHIGEAANYVQILKEKVNVLEKKRDKLKETISSTMIETENELPADPSNLVKCVNINQIPDGVEIVICRGFEDSPSRLSDLMKIIVQEGCDVVHCVTNHVNGKIFHTIKSEVEDLTHFDLARLQNKLDQAILLSR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi121g00015 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 70 IPR011598 GO:0046983
Vivi121g00015 191 Coils Coil 67 94 - -
Vivi121g00015 191 Gene3D - 8 98 IPR036638 GO:0046983
Vivi121g00015 191 CDD bHLH_AtORG2_like 19 89 - -
Vivi121g00015 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 17 183 - -
Vivi121g00015 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 91 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi121g00015 16 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 32.558 1.05e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi121g00015 - - ccaj:109790384 244.202