Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi121g00014 ATGGCGGAAGATCAGAATCAACATAAAATATTAAATACTTTGGTCAATGATGAGAAGAAGATCATTCGTAGGGAAGTTGAAAAGCAAAGGAGGATGCAAATGTCTATTCTATGTTCATCACTCCGTTCTTCAATCCCTTTTCACCTCATCAAGCTTTCAGTATCAGATCACATAGGTGAGGCTGCAAATTATGTCCAAATTTTGAAGGAGAAGGTTAACGAACTCGAAAAGAAAAGGGATAAGCTCAAAGAAATTATTAGTTCAAGCATGATTGAAACTGAAAATGAATTACCAGCAGATCCTTCAAATTTAGTGAAGTGTGTCAACATTAATCTAATTCCAGATGGGGTGGAAATTGTTATATGCCGTGGTTAA 375 0.3573 MAEDQNQHKILNTLVNDEKKIIRREVEKQRRMQMSILCSSLRSSIPFHLIKLSVSDHIGEAANYVQILKEKVNELEKKRDKLKEIISSSMIETENELPADPSNLVKCVNINLIPDGVEIVICRG 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi121g00014 124 Gene3D - 12 96 IPR036638 GO:0046983
Vivi121g00014 124 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 17 121 - -
Vivi121g00014 124 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 87 IPR036638 GO:0046983
Vivi121g00014 124 Coils Coil 58 92 - -
Vivi121g00014 124 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 68 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi121g00014 16 95 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 42.683 2.79e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi121g00014 - - vvo:131624773 243.047