Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi121g00013 ATGCTGTCCTCCGCATCACCACCGCCACATCCTCCGCCTCAAGCAAAGAAAAAACAGAGTTCCACCGTCGTTACTGGTTGCTCTTTCCTCTTCGCGCTTCTCCACTGCCTCCGCAACGAAAAACGAACTACTCCATCCTCCGACTCAGACTCCAACCCTCCTCATCCCTTCTCCTACTCCCTCCTCCGCCGCGCAACGAACTCGTTCTCCAATATCCTCGGTCACGGTGGATTTGGTCCTGTCTATTCCGGTACCCTCCCTTCCTCCGGTAAACTAATCGCTGTCAAGCTTATGAACTCTATTACTTCCTCCGTCGGCTGCCAAGGCGAACGTGAATATCACAACGAACTCTTCTTTGCCGCCAGACTCAATTCCAACCTCCTTGTCCCCGCAATCGGTTTCTCATCCGATCCAAAACGTCGCCGTTTCCTTCTCGTATATGATCTCATGAAAAACGGTAACCTCCATGACGCGCTTTTCCGTCGTAAATACCCCGAGTTAACGCTATGGAAAACACGGTTTTCGATAATTCTCGATGTCGCGAAAGGAATTCAATATCTTCATTCTTGCGATCCGCCAATCATCCATGGTGATATTAAACCTAGTAATATTCTCCTTGATCATTCCTTTTCGGCTAAAATTGCAGATTTTGGTCTCGCGAGGTTGAAAACCTTTTCACCTTTCGAGTTCAGAAAAGAGGAGTTCGATAGTGATGAGACAGAAATTGAGAGTGTTAACACTAGCTTTGAAGAATATGAAACAGACATGGTTGGTAGTGTTGGTGGCAGAATGAAGAAGAATGGGAGTGTAAAGGATTATGTAATGAATTGGATTGGTAAAGAAGTGAAGGAGGAAAGTTCAAAGAATGGTGAACTGTTGGGTGGAAATGGAAGTGGAAAGGTAGAGAAAAGCAAGAGCAAGAAGAAAATGGAGTGGTGGGAATCAATGGAGGAGGGAAATGGAAAGGGTGATTTGAAGAAGAAAGAGAAGAGAAGACCGGCAAGGGAGTGGTGGAAGGAAGAGTATTCTAAAGAGCTCGCCAACAAGAACAGGAAGAAAAAGAGTGGAAAAGATGGTGATAGTTGGTGGAAGTGGGAGAGAGATCGCGATGATGTTGATGATAATGATGCGAAAAAAAGTAGTAAAAACCGTAGCAGAAAGGATCGTGGTAGTGGTGATTCATGGTTGAGTGGTAGTGGTGAGTTAAGGAGAGTTAATTGGAATAGCTATGATTCATGTAATAGCGGAGAAATTCAAAAGAGTGGTGAAATCAGCAGTACAACAAGTATGCGAGGAACTGTTTTTTACGTCGCGCCTGAAAATGGTTATAGTGGTAATGATATAACAGAGAAATGTGATGTTTATAGTTTTGGGGTGTTATTGCTTGTTATTGTTTCTGGGAGGAGGCCTCTTCAGATGAATGATGATGGTGTGCATGTTTCTGAGTTTAAGAGAGCAAATTTGGTGTCTTGGGCTAGACATTGTGGACGGAATGGGAAACTACTTGAACTTGTTGATCCTTGTGTTGAGATGTTGTTAGGGGATGATAGAGAGCAGGCTCTTCTGTGCATTAGAGTTGCATTGATTTGTTTGATGAAATCGCCTAATCGACGTCCTTCGATGAAACAAGTTGTGAGAATGCTTAGTGGGGAATTGAAACCACCTAAATTGCCACATGAGTGCTCGCAAACTCGATTCCAATTCAAGAATCGGAAAGAAAATTTGTGA 1728 0.4387 MLSSASPPPHPPPQAKKKQSSTVVTGCSFLFALLHCLRNEKRTTPSSDSDSNPPHPFSYSLLRRATNSFSNILGHGGFGPVYSGTLPSSGKLIAVKLMNSITSSVGCQGEREYHNELFFAARLNSNLLVPAIGFSSDPKRRRFLLVYDLMKNGNLHDALFRRKYPELTLWKTRFSIILDVAKGIQYLHSCDPPIIHGDIKPSNILLDHSFSAKIADFGLARLKTFSPFEFRKEEFDSDETEIESVNTSFEEYETDMVGSVGGRMKKNGSVKDYVMNWIGKEVKEESSKNGELLGGNGSGKVEKSKSKKKMEWWESMEEGNGKGDLKKKEKRRPAREWWKEEYSKELANKNRKKKSGKDGDSWWKWERDRDDVDDNDAKKSSKNRSRKDRGSGDSWLSGSGELRRVNWNSYDSCNSGEIQKSGEISSTTSMRGTVFYVAPENGYSGNDITEKCDVYSFGVLLLVIVSGRRPLQMNDDGVHVSEFKRANLVSWARHCGRNGKLLELVDPCVEMLLGDDREQALLCIRVALICLMKSPNRRPSMKQVVRMLSGELKPPKLPHECSQTRFQFKNRKENL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi121g00013 575 MobiDBLite consensus disorder prediction 285 330 - -
Vivi121g00013 575 MobiDBLite consensus disorder prediction 1 15 - -
Vivi121g00013 575 Gene3D Transferase(Phosphotransferase) domain 1 59 247 - -
Vivi121g00013 575 SUPERFAMILY Protein kinase-like (PK-like) 51 560 IPR011009 -
Vivi121g00013 575 Gene3D Transferase(Phosphotransferase) domain 1 408 563 - -
Vivi121g00013 575 Pfam Protein kinase domain 71 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi121g00013 575 Pfam Protein kinase domain 423 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi121g00013 575 MobiDBLite consensus disorder prediction 1 21 - -
Vivi121g00013 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Vivi121g00013 575 MobiDBLite consensus disorder prediction 301 330 - -
Vivi121g00013 575 MobiDBLite consensus disorder prediction 372 395 - -
Vivi121g00013 575 PANTHER OS07G0586332 PROTEIN 266 573 IPR044576 -
Vivi121g00013 575 SMART serkin_6 67 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi121g00013 575 MobiDBLite consensus disorder prediction 372 391 - -
Vivi121g00013 575 ProSiteProfiles Protein kinase domain profile. 67 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi121g00013 427 548 Receptor kinase-like Gene Family AT3G58690 33.858 7.35e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Vivi121g00013 Pkinase 2.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi121g00013 - - psat:127097028 936.021