Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1212g00003 ATGGAAAGATCATCACTCTCTTCATCTACTAAAAGGAGAGGTATTAAGAAAAGAGTAGTGGAAATTCCAATGAAGGATGTGGAAGGGACTAATACCCCACCGTCCGATTCATGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCCCCTTATCCAAGAGGATACTATAGGTGTAGCAGTTCAAAGAATTGTCCGGCGAGAAAACAAGTGGAAAGGAACCATGAGGACCCCACGGTGCTTCTTGTAACATACACTTCCGATCACAACCACGCCGTGCCGCCACCTAGAAGCTACCGTAATACTAGCAACGCCGCTGCGTCGAACAAAGACTCTGAATCAGAGCAGGAGGCTGAACCTGAAACTGAGGAGATATTTGCGGATCTTGGAGAGGTGTCGTTGATGGCTACCGCGGATGGGTTAGGCGGATGGTTGGGGGAAGTGGAGGCGATTGCGTCGCCGGGGGTTTTGGAGTGTCCGGTTTTCTCGGAGCAGGAGGTGTCGATGTTGGGGGAAGAGGAGATGTCGCTGTTTGCGGATTTGGGGGAGTTACCGGAGTGTTCGGCGGTGTTTTGGAGAGGGAGGAGGAGTGCCGGCGATGTGAGTGTGGGACCACTGGTTGAGGCAAATTGCTCACTGTGA 645 0.5178 MERSSLSSSTKRRGIKKRVVEIPMKDVEGTNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKNCPARKQVERNHEDPTVLLVTYTSDHNHAVPPPRSYRNTSNAAASNKDSESEQEAEPETEEIFADLGEVSLMATADGLGGWLGEVEAIASPGVLECPVFSEQEVSMLGEEEMSLFADLGELPECSAVFWRGRRSAGDVSVGPLVEANCSL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1212g00003 214 SMART WRKY_cls 34 94 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1212g00003 214 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 125 IPR044810 GO:0003700
Vivi1212g00003 214 Gene3D WRKY domain 22 96 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1212g00003 214 MobiDBLite consensus disorder prediction 97 112 - -
Vivi1212g00003 214 ProSiteProfiles WRKY domain profile. 35 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1212g00003 214 MobiDBLite consensus disorder prediction 1 54 - -
Vivi1212g00003 214 Pfam WRKY DNA -binding domain 36 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1212g00003 214 SUPERFAMILY WRKY DNA-binding domain 31 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1212g00003 214 FunFam WRKY transcription factor 65 17 95 - -
Vivi1212g00003 214 MobiDBLite consensus disorder prediction 89 123 - -
Vivi1212g00003 214 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1212g00003 4 209 WRKY Transcription Factor Family AT1G29280 47.788 2.94e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi1212g00003 WRKY 3.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1212g00003 - - mtr:25486010 367.466