Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi120g00009 ATGTCAAGAGCCAAAGAGGTTATCACATGCAAAGCTGCAATATGCTGGGGTGTAGGAAAAGCAGTGACGGTGGAAGAGATACAAGTAGATCCACCAAAGGCAACAGAAGTTCGTGTTAAGATGCTGTGTTCTAGTGTCTGCCATACAGACATCTCAAGCCTTCAAGGATTCCCACATAATCAGTTTCCTCTAGCACTTGGACACGAAGGAATCGGCGTTGTAGAGAGTGTCGGTGAAGAAATAACAAATCTAAAGGAAGGAGATTTTATAATTCCAACATACATAGGGGAGTGTGAAGAATGTGAGAACTGTGTTTCAGGGAAAACCAATTTGTGTTTGACACATCCTGTAACACTGAGTGGTCTAATGCCGGATAACACTTCAAGGTTGTCGGTACGAGGCCAAACTCTGTATCATGTTTTTAGTTGTGCTACATGGTCAGAGTATGCGGTTGTTGATGTTAACTACCTTCTCAAAGTTGACCCAACCATTAATTTAGCTCATGCTAGTTTCATCTCATGTGGTTTTTCAACCGGATTTGGAGCTTGTTGGAAGGAAGCCGCTGTTGAACCCGGTTCAACCGTAGCTGTTTTTGGTCTCGGGGCTGTTGGATTAGGGGCCATAAGTGGGGCTAAGATGATGGGAGCAAGTAAGATAATTGGAGTTGACAAAAATGAGAAGAAGAAAGAAAAAGGAGAAGCTTTTGGAATGACAGACTTTATAAATACTACTGATTCTGATAAATCTGCTTCAGATTTGGTTAAAGAGTTAACCGGAACCGGTGTAGATTACTGTATTGAATGTACTGGTGTTGCATCTTTGTTTACTGAATCTGTGGAAGCCACAAAAATAGGAACAGGTAAAACAATTGCAGTCGGTATAGCAGCTGAACTTGTTGTGCCGTTTGGACTTCTTGCCATTGTGTTTGGTAGAACCATAAAAGGTTCTGTTTTTGGTGGTTTAAAAGCTAAATCCGATCTTTCTGTCATTGCTCACAAATGTCAAAAACAGGAACTCCCTCTTGAAGAACTTTTCACACACGAGGTTCCTTTGGTTGATATAAACAAAGCGTTTGAGTTGTTGAAACAACTCGACTGTGTGAAAGTTGTTATCAAGATCTAA 1122 0.41 MSRAKEVITCKAAICWGVGKAVTVEEIQVDPPKATEVRVKMLCSSVCHTDISSLQGFPHNQFPLALGHEGIGVVESVGEEITNLKEGDFIIPTYIGECEECENCVSGKTNLCLTHPVTLSGLMPDNTSRLSVRGQTLYHVFSCATWSEYAVVDVNYLLKVDPTINLAHASFISCGFSTGFGACWKEAAVEPGSTVAVFGLGAVGLGAISGAKMMGASKIIGVDKNEKKKEKGEAFGMTDFINTTDSDKSASDLVKELTGTGVDYCIECTGVASLFTESVEATKIGTGKTIAVGIAAELVVPFGLLAIVFGRTIKGSVFGGLKAKSDLSVIAHKCQKQELPLEELFTHEVPLVDINKAFELLKQLDCVKVVIKI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi120g00009 373 CDD liver_alcohol_DH_like 8 372 - -
Vivi120g00009 373 Gene3D - 179 316 - -
Vivi120g00009 373 Pfam Alcohol dehydrogenase GroES-like domain 35 159 IPR013154 -
Vivi120g00009 373 PANTHER ALCOHOL DEHYDROGENASE 6 365 - -
Vivi120g00009 373 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Vivi120g00009 373 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 316 - -
Vivi120g00009 373 SUPERFAMILY GroES-like 5 187 IPR011032 -
Vivi120g00009 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 327 IPR036291 -
Vivi120g00009 373 Gene3D - 13 368 - -
Vivi120g00009 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Vivi120g00009 373 Pfam Zinc-binding dehydrogenase 202 321 IPR013149 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi120g00009 35 365 Monolignol Biosynthesis Gene Families AT2G21730 27.083 9.14e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi120g00009 K00121 - gmx:100798341 582.793