Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1209g00008 ATGAAGGTTCTTCAAAGCGTTTTCATCAACCAGGATTTGAATATGTATTACGAGGAAACGGATAAGCCAGCGCACGCTCGTACGTCGAATTTGAACGAAGAACTTGGTCAAGTTGATACCATACTTTCTGATAAAACAGGAACATTGACTTGTAACTCTATGGAGTTTATCAAGTGTTCTATTGGTGGAGTTGCTTATGGAAAAGGATTTACGGAAGTCGAGAGAGCTTTATCAAAGAGAAAAGATTCGTATTTCGGCCGCAAGTTGAAAGAGGAAGACACTACTAAGGCTGTGAAATCGAAGTCGAAGATTAAAGGATTTAACTTTATGGATGAAAGGATCATGAATGGAAATTGGGTGAAACAGACTAATGCTAATGTGATACAGAATTTCCTAAAGGTTTTGGCTGTATGTCATACTGCAATACCTAAAGTTGATGAAGCAACCGGTAGCATTTCGTACGAAGCTGAATCGCCGGATGAGGCTGCTTTTGTTGTTGCAGCCAGCCAATTCGGATTCGAATTTTATGAAAGAACAAATGCAGCTATTTCAGTTCATGAATTGGACCTCGAATCAAATGTGAAATCAGAAAGGTCTTATAACCTTTTGAATGTATTAGAGTTTACGAGTGCACGAAAACGGATGTCCGTAATCGTAAGAGACCACACTGGGAAACTACTACTACTTAGCAAAGGTGCTGACAGTGTCATGTTTGAGCTACTTGGAAAGAATGGAAGAGAATTTGAAGAGCAAACTAAGTATCACATTAACGAATACGCCGATTCTGGTTTAAGGACATTGATACTCGCGTATCGTGAACTCGACGAGGCAGAGTACAATCAGTTTAATAAAGAGTTGACAGATGCGAAAAACTTAGTGAGCGCGGATCAGGAGCAGATTGTAGAGGATATATTGCAAAAGATTGAGAAGGATTTGATTCTTCTTGGTGCTACCGCAGTCGAGGATAAACTACAAGACGGGGTTCCTGAATGTATTGACAAACTAGCACAGGCTGGGATTAAGTTATGGGTTTTGACAGGTGATAAAATGGAAACGACAATTAATATTGGGGGTTGGAGCTACAATAGGAGTTGGAGTGTATATTCTCATTGGAACCGTTATTAG 1125 0.3982 MKVLQSVFINQDLNMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGKGFTEVERALSKRKDSYFGRKLKEEDTTKAVKSKSKIKGFNFMDERIMNGNWVKQTNANVIQNFLKVLAVCHTAIPKVDEATGSISYEAESPDEAAFVVAASQFGFEFYERTNAAISVHELDLESNVKSERSYNLLNVLEFTSARKRMSVIVRDHTGKLLLLSKGADSVMFELLGKNGREFEEQTKYHINEYADSGLRTLILAYRELDEAEYNQFNKELTDAKNLVSADQEQIVEDILQKIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETTINIGGWSYNRSWSVYSHWNRY 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1209g00008 374 Coils Coil 272 292 - -
Vivi1209g00008 374 SUPERFAMILY HAD-like 308 357 IPR036412 -
Vivi1209g00008 374 Pfam Cation transport ATPase (P-type) 153 239 - -
Vivi1209g00008 374 Gene3D - 82 318 IPR023299 GO:0000166
Vivi1209g00008 374 NCBIfam phospholipid-translocating P-type ATPase 2 357 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi1209g00008 374 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 114 316 IPR023299 GO:0000166
Vivi1209g00008 374 FunFam Phospholipid-transporting ATPase 157 315 - -
Vivi1209g00008 374 Gene3D - 319 358 IPR023214 -
Vivi1209g00008 374 ProSitePatterns E1-E2 ATPases phosphorylation site. 44 50 IPR018303 -
Vivi1209g00008 374 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 357 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1209g00008 1 357 Primary Pumps ATPases AT1G68710 70.166 7.13e-178 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1209g00008 K01530 - vvo:131640516 743.036