Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1206g00008 ATGGTCTCTTTAAGACCATTCCTTCTTTTTCTTCTCACCAGCATTCTAATTCATCACTCATGTTCCAAAAAAGATCGCAAGACTTATATTGTCTATATGGGTGATCATCCCAAGGGTATTGACCCAGCCACTTTACCTTCACTTCATTCCATAATGGCTCAAAATGTCCTTGGCAGTAAATTAATTGGTGCACGATACTTTAATATCGAGAGTGCCTATGGTAAAAAAGATATCAAAGCTCCAAGAGATATAAATGGGCATGGGACACATTGTGCATCCACAATAGCCGGAAACACGGTTCATTCGGTAAGCCTAGAAGGGTATGCCTCAGGGACAGCACGCGGAGGAGTTCCTTCCGCACGTATTGCTGTGTACAAAGTATGTTGGGAAGGAGGATGCGACGATACTGATATCCTTGCAGCGTTTGATGCAGCACTTGCTGACGGCGTTGATGTTCTTTCCGTCTCTCTTGGACCTGCAGAAATGCAAATACCATTTATTCAATATTTTGAAAATTCTATTAACATTGGTAGTTTCCATGCAATGAAAAAAGGTGTATTAACCTCGAATGCCGCTAGTAATTTTGGTCCGGATGTTTTCACTATGACAAATTTTCCACCATGGTTACTTTCCGTAGCTGCTAGTACTTTTGGAAGAAAGTTCGTTACGAAAGTGCAACTGGGAAATGGTAAAGTTTATGAGGGGTCAACAATTAACACATTTGATCTCAAAAACAAAATGTTTCCAATAATTTTCGCAAGAGATATACCCAATACTGCTGGTGGATTTAACAGTTCTGAATCAAGGCGTTGCTCCAAGGACTCGGTAGATAAACACGCAGTAAAGGGAAAGATAGTTTTATGCGAATGGGTTCAAGATTCTTCAGATGTGGGATTTTTCTCAGGAGCTGTTGGTGTAATATTTGGATTTGTTTATTCACAAGATTCTCCATCTATATATGCCTTGCCAACCACGTTACTCAGTCTATGGGATTTTAGAGAAATTCAATACTACATGAAATCAACAAAAAATCCAACTGCCACGATATTTAAGAGTGAAGAAGTCGAAGATTTGTTGTCCCCTTATGTAGCTTCGTTTTCATCAAGAGGTCCGAATCCAATTACACCAAATATTCTCAAGCCTGATATCACTGCCCCGGGAGTTAATGTTATAGCTGCATGGACTCCACTTGACCCGATTTCTGAATTTGAAGATGACAAAAGAATATTATCATATAATGTTATCTCGGGAACTTCAATGGCATGTCCTCATGCAGCTGGAGCAGCCGCATATGTTAAATCATTTCACCCTAATTGGTCTCCTGCTATGATCAAGTCTGCACTTATGACCACTGCTACTCTAATGAGTCCTGCTTTAAATCCCGAAGCTGAATTCGCATATGGCGCTGGGCAGATAAATCCTGTTAAGGCAACAAATCCAGGATTAGTATATGATATTAGCGAAGCAGATTATGCCAATTTCTTGTGCGGAGAAGGGTACACAGATAAACAACTACGAAATCTTACTAAAGATAAGAGTAACTGCAAGGTGAAAGCTAATGAGAAAGAAGTATACAATTTGAATCTTCCATCATTTGCTCTTAAAATAAACCATACGTTTTTCGGTCATGTTTACCATAGAACGGTAACAAATGTGGGATCAGCAAAATCTATTTATAAAGCAAGAGTAATATCTCCGTCTTTGTTGGAAATTCAAGTGAAACCTAATGTTCTGTCTTTCACATCTATAGGACAGAAAAAAACATTCTCGCTTACGATTGAAGGGAAGATTAATGTGGAAGTAATGTCTGCTGCTTTGATTTGGGATGATGGGAGTCATCAAGTTAGAAGCCCAATTGTTGTGTATGGGAAGTATGCTTGA 1881 0.3918 MVSLRPFLLFLLTSILIHHSCSKKDRKTYIVYMGDHPKGIDPATLPSLHSIMAQNVLGSKLIGARYFNIESAYGKKDIKAPRDINGHGTHCASTIAGNTVHSVSLEGYASGTARGGVPSARIAVYKVCWEGGCDDTDILAAFDAALADGVDVLSVSLGPAEMQIPFIQYFENSINIGSFHAMKKGVLTSNAASNFGPDVFTMTNFPPWLLSVAASTFGRKFVTKVQLGNGKVYEGSTINTFDLKNKMFPIIFARDIPNTAGGFNSSESRRCSKDSVDKHAVKGKIVLCEWVQDSSDVGFFSGAVGVIFGFVYSQDSPSIYALPTTLLSLWDFREIQYYMKSTKNPTATIFKSEEVEDLLSPYVASFSSRGPNPITPNILKPDITAPGVNVIAAWTPLDPISEFEDDKRILSYNVISGTSMACPHAAGAAAYVKSFHPNWSPAMIKSALMTTATLMSPALNPEAEFAYGAGQINPVKATNPGLVYDISEADYANFLCGEGYTDKQLRNLTKDKSNCKVKANEKEVYNLNLPSFALKINHTFFGHVYHRTVTNVGSAKSIYKARVISPSLLEIQVKPNVLSFTSIGQKKTFSLTIEGKINVEVMSAALIWDDGSHQVRSPIVVYGKYA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1206g00008 626 Pfam Fibronectin type-III domain 526 621 IPR041469 -
Vivi1206g00008 626 SUPERFAMILY Subtilisin-like 58 482 IPR036852 GO:0004252|GO:0006508
Vivi1206g00008 626 Gene3D - 218 356 - -
Vivi1206g00008 626 ProSiteProfiles Serine proteases, subtilase domain profile. 1 478 - -
Vivi1206g00008 626 PRINTS Subtilisin serine protease family (S8) signature 416 432 IPR015500 -
Vivi1206g00008 626 PRINTS Subtilisin serine protease family (S8) signature 83 96 IPR015500 -
Vivi1206g00008 626 Gene3D - 495 624 - -
Vivi1206g00008 626 ProSitePatterns Serine proteases, subtilase family, serine active site. 417 427 IPR023828 -
Vivi1206g00008 626 ProSitePatterns Serine proteases, subtilase family, histidine active site. 87 97 IPR022398 -
Vivi1206g00008 626 Pfam Subtilase family 75 470 IPR000209 GO:0006508|GO:0008236
Vivi1206g00008 626 Gene3D Peptidase S8/S53 domain 59 491 IPR036852 GO:0004252|GO:0006508
Vivi1206g00008 626 CDD PA_subtilisin_like 225 349 - -
Vivi1206g00008 626 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 621 IPR045051 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1206g00008 59 622 Subtilisin-like Serine Gene Family AT3G46850 46.503 1.34e-163 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1206g00008 - - gmx:100815516 763.837