Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi11g00134 ATGCGAATAGCCAAGGATGTTTGGGAAATTCTTCGGACAACTCATGAAGGTACATCTAAAGTGAATATGTCAAGACTTCAGCTTCTCACTTCTAAATTTGAAAATCTGAAGATGAATGATGGTGAGATCATCCAGGAATATCATATGAAGGAGGGAAGTATTTTGAAGCATCTTAGTCTTTTGGCATTGGATCAAAGAATAAGAATCCAGCAGAGTTATCAAACCCTAACAACATTTAAACCCTTGAAGTTTAACATGCAGGATCTTGTTCAAGTTAGAAGCTTTAGAAATGGTTATTATAACAACCATGAGGAACCTGTTGTTGTTTATTCTTCATCAGAAAACCCTAACTTCTTTACTACTTTGAATCCTTTGGAGTATCAGGAGCAACTTGGTGCAAGTGCAGAAGAATCAAGTAGGTTATTCATGATGCAACATCATCATCATCAACAGCAGCAGCAGTATGGTTCATATGCTAATTCTTTGACTGATTTTCATTCTCCTCAACAAAAGCAAGTGAGTGATTTTGGAAACTGGAGAAACAGTACTGTTCAACATCAAGTCACTGATAGGTTTTTAAATAATGCAACAAATTATCTTCCATGTGTTTATGGCGGTGATAAGCAACTAGGTCAAGTCATGCATCATACTCCTACTTCTTCAGCACTGTTTCAGAATCATCATTCTTTGCAAGATATTGTCAAGTCCATCACTTCCAATGGCTCAGATTCTCACATGACATCACTCATGCATCATAACCATGGTCAAGAGATTTGTGTAGTGAATGCTTCTGAACTTCAACACCAACCAAATCAGTTTGAGTTTGGATGGAAAAATCAATCAGATTCAAATCCACAAAGCTTATCATTATCACTCTCATCTAAGGCTCATGTTTCTCAGTTTAAAGAGGAGGATCCATATGTGAAGCCTTCTTTTGTTACTAGAGATTATGGAAAACCACTTCAAGATTTGGTGGTTGGAGTAATACCTAATTCAAAGACTACTACTAGTTATGGAAATGTGGGTCCACTTGGCCCTTTCACTGGTTATGCCACTATTCTTAAGAATTCAAGATTCTTAAAGACTGCCCAAAATTTGTTATCAGAAGTTTGCTGTCCAAAATCTGTGTCAATATGTGATGTTACAGAAACTGAAGTTGCTTCTATAGAAAGTCATTCATGTTCATCACCCTCTATGTTTCATGGTACAAAAGAAAATAGAGCTGATTGGGGATCTAGAAGTAGTTTTGGTGTTTCTTTGCAGCCAGATTATCAACAAAATAAAGCAAAACTTGTGTACATGCAAGAAGAGGTCAACAGAAGATACAAGCAGTACCAACACCAAATGCAAATGGTATTTTCATCTTTTGAATCAGTAGCAGGTCTTAATTCAGCCACTCCTTACATCACCTTGGCTTTGAAGTTAGTATCAAAACACTTCAAGTGCCTAAACAATTCTATTTCAAATCAGCTCAAACTTATAAGTGAAGTCATGCAGAACGATTCTTCCATAGCCACCATAAACAATAGTACTCACCTTGTTGACACTAATAATGTGGCAAGCGTAAGGTGGATGGACCAAAGCATGCAAAAGAACAAACTTGAAAAGGTTATAACAGGTTTCCATGATCCACAGCAACATCATGTTTGGAGGCCTCAAAGAGGCTTTCCCGAACGCGCGGTTGCGATCCTTAGAGCTTGGTTGTTTGAACATTTTCTTCACCCTTATCCTACCGACACTGATAAACACATGTTGGCTACTAAGACAGGTCTTTCAAGAAACCAGGTATCAAATTGGTTTATCAATGCCCGTGTTCGGGTGTGGAAGCCTATGGTTGAGGAAGTACACATGCTTGACCAAAAAACAACCGGTAACGATGAGAATTCCAATCGAAATGAAGGAACTTCCAGCACTGAAGGTGGCTCATACAACCAGGATAAAATGGATAAAACAATGAACAGATTTTTCTTGCATTCAATACCTGAAAACCAAATTCAGGATATGGAGTTTGGTACATCTATAGATAAAAATGCAGATGAAATTGAGTTGAATGAAGCTGAACAATGGAGACAAGAGAAGCGGTCGAAATTGGAATGGGAGATGAGTTCAAGAATGGATGGAACACTGATGGATTTTTTGCCATATAGACATAGTGGACATGATGTTGGAGGATCACTTGGGTCTGTTTCATTGACATTAGGTCTTAGGCATGGTGTTGAAGGTGTACAACACCAAGATGTTCAATTTAGACATCATCATCACCTTGGTGGGCAAATGATACATGACTTTGTAGGATGA 2298 0.3803 MRIAKDVWEILRTTHEGTSKVNMSRLQLLTSKFENLKMNDGEIIQEYHMKEGSILKHLSLLALDQRIRIQQSYQTLTTFKPLKFNMQDLVQVRSFRNGYYNNHEEPVVVYSSSENPNFFTTLNPLEYQEQLGASAEESSRLFMMQHHHHQQQQQYGSYANSLTDFHSPQQKQVSDFGNWRNSTVQHQVTDRFLNNATNYLPCVYGGDKQLGQVMHHTPTSSALFQNHHSLQDIVKSITSNGSDSHMTSLMHHNHGQEICVVNASELQHQPNQFEFGWKNQSDSNPQSLSLSLSSKAHVSQFKEEDPYVKPSFVTRDYGKPLQDLVVGVIPNSKTTTSYGNVGPLGPFTGYATILKNSRFLKTAQNLLSEVCCPKSVSICDVTETEVASIESHSCSSPSMFHGTKENRADWGSRSSFGVSLQPDYQQNKAKLVYMQEEVNRRYKQYQHQMQMVFSSFESVAGLNSATPYITLALKLVSKHFKCLNNSISNQLKLISEVMQNDSSIATINNSTHLVDTNNVASVRWMDQSMQKNKLEKVITGFHDPQQHHVWRPQRGFPERAVAILRAWLFEHFLHPYPTDTDKHMLATKTGLSRNQVSNWFINARVRVWKPMVEEVHMLDQKTTGNDENSNRNEGTSSTEGGSYNQDKMDKTMNRFFLHSIPENQIQDMEFGTSIDKNADEIELNEAEQWRQEKRSKLEWEMSSRMDGTLMDFLPYRHSGHDVGGSLGSVSLTLGLRHGVEGVQHQDVQFRHHHHLGGQMIHDFVG 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi11g00134 765 SMART HOX_1 550 614 IPR001356 GO:0003677
Vivi11g00134 765 Pfam Associated with HOX 353 488 IPR006563 -
Vivi11g00134 765 SUPERFAMILY Homeodomain-like 551 616 IPR009057 -
Vivi11g00134 765 CDD homeodomain 550 611 IPR001356 GO:0003677
Vivi11g00134 765 MobiDBLite consensus disorder prediction 622 645 - -
Vivi11g00134 765 Pfam Homeobox KN domain 567 606 IPR008422 GO:0003677|GO:0006355
Vivi11g00134 765 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 255 633 - -
Vivi11g00134 765 MobiDBLite consensus disorder prediction 619 645 - -
Vivi11g00134 765 Gene3D - 553 615 - -
Vivi11g00134 765 SMART prehox3 348 489 IPR006563 -
Vivi11g00134 765 ProSiteProfiles 'Homeobox' domain profile. 547 610 IPR001356 GO:0003677
Vivi11g00134 765 FunFam BEL1-like homeodomain protein 9 553 615 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi11g00134 285 638 Homeobox Transcription Factor Family AT5G02030 45.152 6.34e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Vivi11g00134 POX 3.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi11g00134 - - vvo:131621397 1498.41