Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi11g00129 ATGGTTATTAGTTACCTTATGCCAGCAGAAGAAGAATCAATTGGTTACAGTTTTCATGTTTCTACAACCCATCACAACTATTCAAGCTATCTCAGTCAAAACCATAGGCTAGATCCTGCCGTGTCCGATTTCTTCAGGTTTCAAGTCACAGCATACGTTCGAGAATTCCTTTCACCAAATCTTATGAGGGGGTCAGAAATATTAAGAACCTCGATACGTATAAATTGCAATGAATTCTTCATGCACGACCAAGATTTCCTTTGGTTATACCTAAGCGAATTCTCCTCTCCATATTTCAACTCTGAAAACCTTTCCCAAATGACAAGGGTTCTTATACCTAAGGTCAAACAATTGTTCCTTCCTAATCCTATTGATGATATTGCGGCAGCTGTTCCCAATCATGTCCAAGAGTTCCCTGTGGATTTGACTATTAAAGTGGAAGACATGAGAACGATTCAAGAGAGAGAACGTGCAGTCATGGAACATTTTGAAAGAATAATTCAAGAGAGAGAACGTGCAGTCATGGAAGAGTCTATGCAATTTGGTCCTGCATCTGATGAAGCTATTTTGTCTCTTAAAGCATACTCACTTCCTCGGAATTGTTGCATATGCATGGAGAGATTTCATGATGAATTAGAAGAAGGCGGTGACAGTGATGACGTGAAGATATCAACCATGGTATGCGGTCATGTTTTTCACTATGACTGTATTGTGAAGTGGCTCCAAACGAGTCGTGCATGCCCCTTGTGCCGTTATGCTATGCCCACTTGA 771 0.406 MVISYLMPAEEESIGYSFHVSTTHHNYSSYLSQNHRLDPAVSDFFRFQVTAYVREFLSPNLMRGSEILRTSIRINCNEFFMHDQDFLWLYLSEFSSPYFNSENLSQMTRVLIPKVKQLFLPNPIDDIAAAVPNHVQEFPVDLTIKVEDMRTIQERERAVMEHFERIIQERERAVMEESMQFGPASDEAILSLKAYSLPRNCCICMERFHDELEEGGDSDDVKISTMVCGHVFHYDCIVKWLQTSRACPLCRYAMPT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi11g00129 256 Pfam RING-H2 zinc finger domain 200 251 IPR024766 GO:0008270
Vivi11g00129 256 ProSiteProfiles Zinc finger RING-type profile. 201 251 IPR001841 -
Vivi11g00129 256 SUPERFAMILY RING/U-box 200 254 - -
Vivi11g00129 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 256 IPR013083 -
Vivi11g00129 256 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 158 255 - -
Vivi11g00129 256 SMART ring_2 201 250 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi11g00129 167 255 C3H Transcription Factor Family AT1G18760 34.021 3.44e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi11g00129 - - vvo:131621396 527.324