LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi11g00093	ATGGAGCATTTGAAGAAATCTCCATCTTCATCATCATCTTCATCAATGAGGCCATCATTTCCAAGAGATCCTCGAGGCTCCTTAGAAGTGTTCAATCCAACCAGCAACTCCAGCTCGCCGGTACGCTCGCCGTCAAACCTGAAAAATTGGACGGAAACGAAAGAAGAGCAGCGCAAGGAAATCTCCGAGCTACATACTGAATTCTCCGATGAAATCACCAACACTTCATGGATGGCAATCAAGGAAGGAGAAACCGGTGCGGCAGTACAGAGAGCCGCCGAGTGGGGATTGGTGCTCACAACAGATGCTGAAACCGGGAAACCTCAAGGAGTGGCAGTTCGGCACTCCGGTGGAGACGAGCCGAATGTCAAACTTGAAACCAAAAGAAACTCCAATAACTCTGTTAGAACTTCCGGTGAGTCTTCCGACGGCGGTGATCCCCGCGGGTTTCCGAGAGTTTCGGAGGATTTGAAAGACGCGTTATCGGCTTTTCAACAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTTTGTATGCAAGTGCGGGTTTCTTCAAAATGACGGGTTATACGTCAAAAGAAGTCATAGGAAGAAACTGTCGGTTTTTACAGGGTGCGGATACGGATCCGAATGACGTGGCAAGGATAAGGGAAGCGTTGGAAGGTGGAAAAAGCTTTTGTGGAAGATTACTGAACTACAAGAAGGATGGAACTCCCTTCTGGAACCTTCTCACTATTTCACCCATCAAGGATGATGATGGCAATGTGCTCAAGTTAATTGGAATGCTGGTGGAGGTTAATAAGCATACTGAGGGGTCCAAAGAGAAGAAGCTGCGTCCCAATGGGTTGCCTGAATCCTTAATTCGATATGATGCTCGTCAGAAAGAGAAGGCTACATCTTCTGTAGATGAGTTATTACAGGCCATGAAGCGCCCCCGCGCATTGAGTGAATCCGGACACCGTCCCTTTATCAGAAAATCAGGAGGAGGTGGAGGTAGTGAAGAAGATGAAGGAACAGAAAGATTAGATAACAAATCGAGGAGAAAATCTGATAGCGTAGCTTCTTTTAGACCAAAACCACAAGGAAAAGTTAGACATTCTATGGAACGAATTAGTGAGCTGCCTGACAATAAACAGAAAAACTCTCGTCGTGGTTCTTTCATGGGGTTCATGAGAAAAAGTCATTCCATTGACGAAAGCATTGATAATGAAGTTATTGTAGATGTGAGCTCTGGGAGTGAGGATGATGAGAGGGATGATAGTTTTGAACTTGATGACAAAGAAAAACTGAGGGAAAAAAGAAAAGGTCTTGATCTTGCTACTACACTTGAGCGTATTGAGAAAAACTTTGTCATTACCGATCCAAGGCTTCCAGACAATCCTATAATCTTTGCATCTGATAGTTTCTTAGAGCTTACAGAATATAGTCGTGAAGAAATCTTGGGGAAAAATTGCAGGTTTCTGCAAGGACCAGAAACTGATCCAGCAACTGTGAGAAAAATCCGAGAGGCAATTGACAACCAAACAGAAGTAACTGTGCAACTAATCAATTATACTAAGAGTGGGAAAAAGTTCTGGAACTTGTTTCATTTACAACCTATGCGTGATCATAAGGGAGAAGTACAATACTTCATTGGTGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTTCACAATTGCATTGCAGAAGACACTGCAAAGGAGGGAGAACTATTGGTAAAAGAAACGGCAGAAAATGTTGGTGAGGCGGTGAAAGAGCTTCCTGATGCTAATCAGAAACCAGACGATTTATGGATGAATCATTCAAAAGTGGTTCGGCCAAAACCTCATAGGAAGGATGATGAAGCTTGGAGAGCAATCCTAAAGGTTGTAGAAAATGGAGAACAGGTAGGCCTAAAACACTTTAGGCCAATTAAACCTTTGGGGTCTGGAGACACCGGAAGTGTGCATCTGGTGGAGCTAGAAGGAACAGGTCATTACTTTGCTATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGCAATAAGGTGCATAGAGCTTGCACTGAAAGAGAAATCCTTGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCTTTCCAGACCAAAACACATGTTTGTTTGATAACTGATTACTATCCTGGGGGAGAACTATTCCTACTTCTTGACCAGCAGCCAACAAAGGTTCTCAAGGAAGATTCTGTTAGATTTTATGCAGCTGAGGTAGTGATTGCGTTGGAGTATCTTCATTGTCTAGGCATAATTTACCGGGATTTGAAGCCAGAAAATGTGCTGATCCAGAGCAACGGACATGTGTCTCTAACAGATTTTGATTTATCATGTTTAACATCTTGCAAGCCACAGCTTATACTTCCAGCTACTGAGGAAAAGAAGAAGAGGAAGAAGAAAAAGAAGGGACAAGAGAAAAATCAAGAGGTTCCAATGTTCATGGCAGAACCAATGAGAGCGTCCAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGTCATACTAGTGCCGTGGATTGGTGGGCTCTAGGTATTCTTCTATATGAAATGCTCTACGGATATACACCATTCAGAGGAAAGACGAGACAAAAGACATTTGCAAACATTCTTCACAAAGATCTTAAGTTTCCCAAAAGCAAACCGGTAAGTCCCCATGGAAAGCAATTAATTTACTGGCTATTGCACAGAGATCCCAAAAACAGATTGGGTTCACTTGAAGGAGCAAATGAAATTAAGAACCATCCATTCTTCAAGAATGTCAATTGGGCTCTAGTTCGTTGCACGAAACCTCCTGAGCTTGACGCTCCTATCTTCCTGGAAAATGGTGAGAAGAAAGAAGCCAAAGACATTGACCCTGGCTTAGATGATTTACAGAAAAATATTTTCTGA	2937	0.429	MEHLKKSPSSSSSSSMRPSFPRDPRGSLEVFNPTSNSSSPVRSPSNLKNWTETKEEQRKEISELHTEFSDEITNTSWMAIKEGETGAAVQRAAEWGLVLTTDAETGKPQGVAVRHSGGDEPNVKLETKRNSNNSVRTSGESSDGGDPRGFPRVSEDLKDALSAFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPNDVARIREALEGGKSFCGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKLIGMLVEVNKHTEGSKEKKLRPNGLPESLIRYDARQKEKATSSVDELLQAMKRPRALSESGHRPFIRKSGGGGGSEEDEGTERLDNKSRRKSDSVASFRPKPQGKVRHSMERISELPDNKQKNSRRGSFMGFMRKSHSIDESIDNEVIVDVSSGSEDDERDDSFELDDKEKLREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLHNCIAEDTAKEGELLVKETAENVGEAVKELPDANQKPDDLWMNHSKVVRPKPHRKDDEAWRAILKVVENGEQVGLKHFRPIKPLGSGDTGSVHLVELEGTGHYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYYPGGELFLLLDQQPTKVLKEDSVRFYAAEVVIALEYLHCLGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSCKPQLILPATEEKKKRKKKKKGQEKNQEVPMFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSPHGKQLIYWLLHRDPKNRLGSLEGANEIKNHPFFKNVNWALVRCTKPPELDAPIFLENGEKKEAKDIDPGLDDLQKNIF	978

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi11g00093	978	SMART	serkin_6	639	933	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi11g00093	978	SUPERFAMILY	Protein kinase-like (PK-like)	626	949	IPR011009	-
	Vivi11g00093	978	FunFam	Putative LOV domain-containing protein	167	323	-	-
	Vivi11g00093	978	FunFam	Putative LOV domain-containing protein	723	945	-	-
	Vivi11g00093	978	Gene3D	Transferase(Phosphotransferase) domain 1	723	943	-	-
	Vivi11g00093	978	CDD	PAS	453	553	IPR000014	-
	Vivi11g00093	978	PANTHER	FLIPPASE KINASE 1-RELATED	129	951	-	-
	Vivi11g00093	978	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	760	772	IPR008271	GO:0004672\|GO:0006468
	Vivi11g00093	978	SMART	pas_2	155	224	IPR000014	-
	Vivi11g00093	978	SMART	pas_2	440	509	IPR000014	-

Showing 1 to 10 of 42 entries

Previous1 2 3 4 5Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi11g00093	1	978	AGC Kinase Gene Family	AT3G45780	67.515	0.0	1309

Showing 1 to 1 of 1 entries

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Vivi11g00093		Pkinase	1e-62	CL0016

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi11g00093	K20715		-	gmx:100817565	1504.96

Showing 1 to 1 of 1 entries