Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi11g00081 ATGTATGCACACTCTAATTCCAACAATATCCCATTATTCTCAAACTCCTTCACTGATTTCACTGAGTTTGACTCGTTCCAAGACACTCTCTCTCCACTCAACAACTCAGATTTGAGCAGTGGCTATAGCAGCTATGGTGGATCACCTTCACCAAGTACTCCCACCTTAATGCAGAGAAGCATTAGCAGCCATTCCTTTCACCATAACAATGGGACCCTCCGCCATCCCCTCTCCGCTTTTTTCGCCGAATTGCTTGACTCAGAAGACGCTCCCGTGCGAAAAGTTTGCAGCACGGGAGATCTCCAGAGGATTAAGAGAATGCAACATAATCATCATTATCATGTGGATAGTCCATTGTCAAGTGAAAGTAGTATGATCATAGAAGGTATGAATAGAGTTTGTCCATATAGCCCAGAAGAGAAGAAACTCAGAATTGAAAGATACAAAAGAAAAAGAAATCAAAGAAACTTCAACAAGAAAATTAAGTATGTTTGTAGAAAGACATTGGCGGACAGGAGGCCGCGAATCAGAGGACGGTTTGCGAGGAACGATGAAATCGATAAGAACATGAGGAGTCACATTGGTGGTGGGGAGGAAGAGGATGAAGAAGATGGGAATTGGATTAATATCTTTGATTCCATAGTTGCTGCAAATCTTGTTCATGATGAGTTTCAAGGAAGTTCATCTTTTGGACTATTGTATTAA 705 0.4142 MYAHSNSNNIPLFSNSFTDFTEFDSFQDTLSPLNNSDLSSGYSSYGGSPSPSTPTLMQRSISSHSFHHNNGTLRHPLSAFFAELLDSEDAPVRKVCSTGDLQRIKRMQHNHHYHVDSPLSSESSMIIEGMNRVCPYSPEEKKLRIERYKRKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNDEIDKNMRSHIGGGEEEDEEDGNWINIFDSIVAANLVHDEFQGSSSFGLLY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi11g00081 234 ProSiteProfiles CCT domain profile. 141 183 IPR010402 GO:0005515
Vivi11g00081 234 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 45 198 IPR045281 GO:0009909
Vivi11g00081 234 Pfam CCT motif 143 183 IPR010402 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi11g00081 137 188 C2C2-CO-like Transcription Factor Family AT5G15850 44.231 5.05e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi11g00081 CCT 5.5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi11g00081 - - gmx:100820236 262.692