Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1197g00002 ATGGCTTCCAACAACAACCACCTTAAAATCCACCAACACTTGAAAGTTGTTCCTCCATTATCATCAACCCAAACAACAACAACAACAATTCCTCTCACATTTTTAGACATATGGTGGCTAAGGTTTCATCCTGTAGAGAGACTTTTCTTCTACACCCTCCCTATTTCACAATCACACCCCTCTTTTTTCTTTCAAAATCTTGTTCCAATTCTCAAATCTTCACTTTCTTTAACCCTCCAACATTTTCTCCCTCTAGCCGGTAAAATCATCTGGCCTTTAGATTCTTCAAAACCTTACATCCAATTCAATTCCAATGATGATGATTATGGAGTTTCATTACTAATGGCAGAATCTAATTCCGATTTCAATCATCTCATTCAAAACTCAACCAAAGTAACTTCTTCGTCTCGTTCTTTTATACCGGTTTTGGAATCAACCGATCTCTTTGCTTCTATAGTTTCCATTCAAATAACCCTTTTTCCAAGAAATGGTTTTTCCATCGGAATTAGCACACACCATGCCGTTCTAGATGGAAAATCTTCAACCATGTTCGTTAAAGCTTGGGCTTATCTATGCAAAAATATCATCGAAACCAAAGAATCGCCAATTTTGTTGCCAGAGTTAGAGCCTTTACTCGATAGAGAAAGCATGAAAGACCGAGATGGACTTAGTGATACACTCACTAAAAATTGGGTCAATGCCATCTCTAAGATGTTCCCAAATGAAAAAGGAAACGAAAAAAGCTTGAAGATTCTCCCTTTTGAACCAAAACTCGAAGATTATGTTCGAGCTACGTTTGAGCTCAAGCGCGAAGATTTGAATAAGATAAAGGAATCGGTGTTATCAAAATCGGAGATATTCAATACAAATGAACCAAAGGCAAAGAGTTTATCATCGTTTGTTCTGACTTGTGCTTATACACTCGTTTGTGTTGCAAAAGCGATTCAAGAAATTCAAAATGAGAGGAAAAAGTTTGCTTTTTTGTTCACAATAGATTGTAGAGCAAGGTTAGAACCACCAATAGCAAGTAACTATTTTGGTAACTGTGTTTTAGCATATTTTGTTAACACACAACCATTGGATTTCATAGATGAAGATGGAGTGTGTTTGGTTGCAAAATGTATTCATGAAAAAATAAAGATGGTAATTGAAAATGATGTTCTTGAAGGAGCTAAAGATGAGCCTAGTAAATTTACAAGTTTGATGAAGGAAGGATATGAAATTATTGGAGTGGCGGGGTCTAATAGATTTGATGTTTATGAAAGTGATTTTGGTTGGGGAAGGCCGGAAAAAGTGGAGATAGTGTCGATTGATAGAGGTTTGACAATTGGTTTGGCAGAGAGCAAAGATGGGAGAGGTGGGATTGAAATTGGACTTGTTCTTGATAACCATGTAATGGATGTCTTTAGCACTTTGTTTCTTCAAGGACTAAACTTGTATTAA 1443 0.3645 MASNNNHLKIHQHLKVVPPLSSTQTTTTTIPLTFLDIWWLRFHPVERLFFYTLPISQSHPSFFFQNLVPILKSSLSLTLQHFLPLAGKIIWPLDSSKPYIQFNSNDDDYGVSLLMAESNSDFNHLIQNSTKVTSSSRSFIPVLESTDLFASIVSIQITLFPRNGFSIGISTHHAVLDGKSSTMFVKAWAYLCKNIIETKESPILLPELEPLLDRESMKDRDGLSDTLTKNWVNAISKMFPNEKGNEKSLKILPFEPKLEDYVRATFELKREDLNKIKESVLSKSEIFNTNEPKAKSLSSFVLTCAYTLVCVAKAIQEIQNERKKFAFLFTIDCRARLEPPIASNYFGNCVLAYFVNTQPLDFIDEDGVCLVAKCIHEKIKMVIENDVLEGAKDEPSKFTSLMKEGYEIIGVAGSNRFDVYESDFGWGRPEKVEIVSIDRGLTIGLAESKDGRGGIEIGLVLDNHVMDVFSTLFLQGLNLY 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1197g00002 480 FunFam Phenolic glucoside malonyltransferase 1 258 479 - -
Vivi1197g00002 480 Gene3D - 8 241 IPR023213 -
Vivi1197g00002 480 Gene3D - 258 480 IPR023213 -
Vivi1197g00002 480 PANTHER - 8 478 - -
Vivi1197g00002 480 Pfam Transferase family 22 470 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1197g00002 22 475 Monolignol Biosynthesis Gene Families AT5G48930 24.101 2.64e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1197g00002 - - tpra:123889238 674.855