Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1196g00002 ATGGATAAAACTCAAGGCTCTATGAACAAGCCTAAACCCCCTATTAAGATTAAGGAGGACACTAATACCACTATGAAGCGAATTCTTATCAAAATCCTTGCTGGAAACGATGTATTGGATTCCATCGTCAATGTTGCTTTGCATCATCAAGCTAATATCATAGTACTAAAAGGTAGTGGTCTTATCTCTGATATTACTTTTCATAACCCAGTGTCCCATGCCTATGTATTCACATTACATGGACCCTTTCAAATGACATCTATATCAGGAGAATATGTTAATACCAACTATGGTTGTGTTCCTTCCGGGCTCACCGATGAACCTATTTATTCCTCCTTTTCCATTTTCTTAACCCGTGGTGATGGAAAAGTGTTTGGTGGGGTTGTTCAAGGAAAGGTTAAGGCTGCACGTGATATTCTAATCACCGCCACTCTTTCAAAGAAGTCCAAGTCTTTTAGGGGAGGCCACAATCATTTGAAGTATTCAAGAATTTAA 495 0.3879 MDKTQGSMNKPKPPIKIKEDTNTTMKRILIKILAGNDVLDSIVNVALHHQANIIVLKGSGLISDITFHNPVSHAYVFTLHGPFQMTSISGEYVNTNYGCVPSGLTDEPIYSSFSIFLTRGDGKVFGGVVQGKVKAARDILITATLSKKSKSFRGGHNHLKYSRI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1196g00002 164 Gene3D - 26 161 - -
Vivi1196g00002 164 ProSiteProfiles PPC domain profile profile. 22 164 IPR005175 -
Vivi1196g00002 164 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 145 IPR014476 GO:0003680
Vivi1196g00002 164 Pfam Plants and Prokaryotes Conserved (PCC) domain 28 143 IPR005175 -
Vivi1196g00002 164 SUPERFAMILY AF0104/ALDC/Ptd012-like 24 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1196g00002 3 143 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 28.671 5.18e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1196g00002 - - vvo:131640436 312.768