Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1192g00004 ATGCTTGCAAAGATGAACATGTTGATTCTTTCATGTCATAGTTTTCAGATTCTATTTGCTCTTGGTGTGCTTTTCATGTTAACTCATATTGAAGCTTCTTCTAGCTCAAAGGTTGACCACCTTCCTGGTTTTCAAGGACCACTTCCATTTGAACTTGAAACCGGGTATGTGGGGTTAGGGGAAACTGATGATGACATGCAAGTGTTCTATTATTTCATCAAGTCAGAGAATAATCCTAAAAAAGATCCTCTTATGCTTTGGTTAACTGGTGGCCCTGGTTGTTCTTCTTTTTCCGGTCTTGTCGATCAAATAGGTCCGTTTGCATTTGAAAAAAAGGAGTACGACGGGAGCGTGCCTAGTTTGGTTTCGAGGCCACAATCTTGGACTAAGCTAAGCAGCATTATTTTTGTTGATTTGCCCTTTGGAACTGGTTTCTCGTATGCTAAAAATGTCACTGCTCATCGAAGCGATTGGAAACTAGTTCATCATGTTCATCAATTTCTTAGGAAGTGGCTGATCGATCACTCTGAATTTCTTTCAAATGAATTCTACATGGGAGCTGATTCATACTCTGGCATTCCTGTACCAGCCATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCAAACCGTTGATAAACCTTCAGGGATATCTACTAGGAAATCCCATGACAACTTTCGAAGAAATCAATTATCACATTCCATATGCTCATGGAATGGGACTCATTTCTAATGAACTCTATGCGTCACTGGAGAGAAATTGTAAAGGAGAATATATTGATGTAGATTCTGAAAACGAGTTATGTTTAAGAGATCTCGAATCCTTTGACGAGTGTCTTTCGGGAATTAATGCGTTCTACATTTTGGATCGCTATTGCAAAGATGACTCGCGTCTATGGAGGAGATCTTTGACTCAAGAGTTGAAGAAACCTCTTAGTTCTCATCTCAAAGTGCCCGAATTAAGTTGCCAAATTTATAGTTTTTACCTAGCAACTAAATGGGCCAATGATCATAATGTTCGTAAGGCACTTCATATTCGAGAGGGAACCATAGGGAAATGGGAACGCTGTTACACTACGGATTTTGAGGAAGATATCCATGGTAGCTTTGAGTTTCATGTAAACCTAAGCAAGAAAGGATACCGCTCTTTGATATACAACGGGGATCATGATTTAGTTGTTCCTTTTACATCTACTCAAGCTTGGATAAGAAATCTAAACTACTCCATTGTGGATGATTGGAGGCCATGGTTTGTAAATGACCAAGTTGGAGGATACACAAGGACTTATTCAAATCGAATGACATTTGCAACCGTGAAGGGTTCAGGTCATACAGCACCTGAGTACACTCCTGAGCAATGCTTTGTCATGTTTAGTAGATGGATATCTAATTTACCTTTGTAA 1407 0.3909 MLAKMNMLILSCHSFQILFALGVLFMLTHIEASSSSKVDHLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENNPKKDPLMLWLTGGPGCSSFSGLVDQIGPFAFEKKEYDGSVPSLVSRPQSWTKLSSIIFVDLPFGTGFSYAKNVTAHRSDWKLVHHVHQFLRKWLIDHSEFLSNEFYMGADSYSGIPVPAIVQEISNGNEKGLKPLINLQGYLLGNPMTTFEEINYHIPYAHGMGLISNELYASLERNCKGEYIDVDSENELCLRDLESFDECLSGINAFYILDRYCKDDSRLWRRSLTQELKKPLSSHLKVPELSCQIYSFYLATKWANDHNVRKALHIREGTIGKWERCYTTDFEEDIHGSFEFHVNLSKKGYRSLIYNGDHDLVVPFTSTQAWIRNLNYSIVDDWRPWFVNDQVGGYTRTYSNRMTFATVKGSGHTAPEYTPEQCFVMFSRWISNLPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1192g00004 468 SUPERFAMILY alpha/beta-Hydrolases 38 467 IPR029058 -
Vivi1192g00004 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 452 IPR001563 GO:0004185|GO:0006508
Vivi1192g00004 468 FunFam Serine carboxypeptidase-like 11 32 468 - -
Vivi1192g00004 468 FunFam Carboxypeptidase 323 467 - -
Vivi1192g00004 468 FunFam Carboxypeptidase 371 465 - -
Vivi1192g00004 468 Gene3D - 324 467 - -
Vivi1192g00004 468 Pfam Serine carboxypeptidase 42 465 IPR001563 GO:0004185|GO:0006508
Vivi1192g00004 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Vivi1192g00004 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Vivi1192g00004 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Vivi1192g00004 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Vivi1192g00004 468 Gene3D alpha/beta hydrolase 30 305 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1192g00004 32 61 Calmodulin-binding Proteins AT2G22960 66.667 1.08e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1192g00004 K16296 - tpra:123922058 777.319