Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1187g00010 ATGAACCACACCCATTTCACCTCAATTTCAATTCTCTTCATATCTTTCTCAATGGAAAATCACAAGACACCCTTTTCCCTTTCTCTTGATACCAAAAATGTTGTCATAGTAAAACCCTCCAAACCCACACCTTCTGAAATTCTCGCACTCTCCACCATTGACAATGATCCTAACATCAACATTCTTTGTCAAACCATATATGTCTACAAAGCAAATAAAAATTTCTCAAATGACCAAAAAGACCCCGCTTCTGTGATAAAAGAAGCTCTCTCAAAGGCTTTGGTTTACTATTACCCTCTTGCAGGAAAACTAACAACACTTGATGATGATGATGAAAAACTTGGAATCAACTGCAATGGTGATGGAGTTCCATTCATGGAAGCAAATGCGAATTGTGATCTCTCTTCACTTAACTATCTTGAAGGCATTGATGTTCCAACAGCACAAATGTTAGTCTTTGATAACCCTTCACAAGACCAAACTAGTCCTCACCCTTTGGTTTTCAAAGTTACAAAGTTTCTTTGTGGTGGTTTCACAATTGGTATGGGATTGTCACATAGTGTTTGTGATGGTTTTGGTGCATCAAAATTCTATAGAGCACTTTCAGAATTTGCAAGTGGAAAAAATGAACCTTCTGTGAAACCTGTTTGGGAGAGAGAGAGGTTAACAGTGAAAAAAACTACTCTTAAAAAAGAAGAACCATTTAAGTTTCTTGTAGATGAAACTTCATTAGCAACTTCACCTTTTTTACCAACCAAAGAAATCTCACATGAATGTTTTAACTTGAATATTGAAACTATAAAAAATCTCAAAATGAAACTAATGAAGGAAATTGATAGTGATAGTGATAGTGATAGTGATAATGTGATGAAGGAAAGTTTCACAATCACAACAGTTGAAGCACTTGGTGCTTATGTTTGGAGGTCAAAAGTAAGAGCTTTGAAACTAAACAATGATGGAAGCACTTTGTTTTGTTTAGCAGTAGGTGTGAGAAACTTAATGGACCCACCTTTGCATGAAGGGTATTATGGTAATGCATTTGTAGGTTCAAATGTGGTGTTAAAAGTGAAAGAGCTTAATGAAAAACCACTTTTTGAAACAGTGAAGCTTATCAAAGAGAGTAAAAAGGCTTCAATGAATGAAGAACATATAAGAAATTCAATGAACATGTTGGAGATAATGAGGAAAAGGAAGATTAAGGTTGAAGGAAGAGGTGCATCATTGGTTTTGACAGATTGGAGACAACTTGGTTTGTTGCAAGAGGTTGATTTTGGTTGGAAGGGTTCAGTTAATATTGTGCCTGTTCCTTGGAACATGTTTGGTTTTGTGGATTTGTGTCTCTTTTTGCCTCCAAATAATTTGGATCCTTTGATGAAAGGTGGAGTTAGGATCTTTGTGTCACTTCCTAAAGCTTCAATGGATAAGTTTAAGGAGGAGATGGAGCTTCTCAAGGGCATGAAAGTGGATGAAGATATATAG 1479 0.3597 MNHTHFTSISILFISFSMENHKTPFSLSLDTKNVVIVKPSKPTPSEILALSTIDNDPNINILCQTIYVYKANKNFSNDQKDPASVIKEALSKALVYYYPLAGKLTTLDDDDEKLGINCNGDGVPFMEANANCDLSSLNYLEGIDVPTAQMLVFDNPSQDQTSPHPLVFKVTKFLCGGFTIGMGLSHSVCDGFGASKFYRALSEFASGKNEPSVKPVWERERLTVKKTTLKKEEPFKFLVDETSLATSPFLPTKEISHECFNLNIETIKNLKMKLMKEIDSDSDSDSDNVMKESFTITTVEALGAYVWRSKVRALKLNNDGSTLFCLAVGVRNLMDPPLHEGYYGNAFVGSNVVLKVKELNEKPLFETVKLIKESKKASMNEEHIRNSMNMLEIMRKRKIKVEGRGASLVLTDWRQLGLLQEVDFGWKGSVNIVPVPWNMFGFVDLCLFLPPNNLDPLMKGGVRIFVSLPKASMDKFKEEMELLKGMKVDEDI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1187g00010 492 Gene3D - 26 234 IPR023213 -
Vivi1187g00010 492 PANTHER ACYL TRANSFERASE 4 28 481 - -
Vivi1187g00010 492 Pfam Transferase family 29 482 - -
Vivi1187g00010 492 Gene3D - 250 480 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1187g00010 27 478 Monolignol Biosynthesis Gene Families AT5G48930 26.882 1.10e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1187g00010 K20240 - gmx:100801843 648.277