Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1177g00002 ATGGAAGGTTTAGCAACTGGGTCGAATGAAAGGAGTGAACTTGTTCGAGTTAGACATGGTTCTGATTCTGGGTCTAAACCTGTAACGAATTTGAATGGTCAGTTTTGTCAAATATGTGGCGATACTGTTGGATTAGCAGCCACGGGCGGTGTTTTCGTTGCTTGCCATGAATGTGCCTTCCCACTTTGTCATCCTTGTTATGAATACGAAATTAAAAATGTGAGCCAATTATGTCCACATTGCAAGACTAGATACAAAACTCACAAAGACGGTCCTAGATTGAAAGGAGATGACGATGAAGAGGATGTCGATGGTCTACGGAATGAGGTCAAGTATGGTCCAGGAAATAATTCTAAGACGGGATGGCAATGGGATGAAGATGCTGACCTCTCTTCGTCTTCTGGACATGATTCTCAATTACAAAATCCCCATCTCACTAATGGACAACTGATGTCTGGTGAGATTGCATGTGCCACATCTGATACTCAATCTGCTCAAACTACATCAGGTCCTTTAGGTCAATCCGGAAACGTTCATTCACGTCCCTATGCTGATCCAAAGCAGCCAGGTCTCGAGAGTGACGAGGAGATCAGACGAGTGCCAGATATGGGAGGTGAATCTGCCGGAACTTCAGCCCCTCGTAAAGGCACTGGTTCAACTGCTGGTCCTGAACGCGCTCAAGGGACTGGAGAGGGTCAGAAGAAGAGAGGGAGAAGCCCAGCTGACAAAGAAAGCAAACGGCTGAAGAGGCTGCTGAGGAACAGAGTTTCAGCTCAGCAAGCAAGGGAGAGGAAAAAGGCGTACTTGAGTGACTTGGAAACAAGAGTCAATGACTTGGAGAAGAAGAATTCAGAGCTTAAAGAAAAACTTTCAACTTTGCAGAATGAGAATCAAATGCTGAGACAAATATTGAAGAACACCACAGCAAGCAGGAGAGGAGGCAATAGTGGTACCAACAATGCTGAATGA 969 0.453 MEGLATGSNERSELVRVRHGSDSGSKPVTNLNGQFCQICGDTVGLAATGGVFVACHECAFPLCHPCYEYEIKNVSQLCPHCKTRYKTHKDGPRLKGDDDEEDVDGLRNEVKYGPGNNSKTGWQWDEDADLSSSSGHDSQLQNPHLTNGQLMSGEIACATSDTQSAQTTSGPLGQSGNVHSRPYADPKQPGLESDEEIRRVPDMGGESAGTSAPRKGTGSTAGPERAQGTGEGQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLSDLETRVNDLEKKNSELKEKLSTLQNENQMLRQILKNTTASRRGGNSGTNNAE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1177g00002 322 Gene3D Single helix bin 265 306 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 159 176 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 113 146 - -
Vivi1177g00002 322 SUPERFAMILY Leucine zipper domain 246 304 IPR046347 GO:0003700|GO:0006355
Vivi1177g00002 322 SUPERFAMILY RING/U-box 20 104 - -
Vivi1177g00002 322 SMART brlzneu 242 306 IPR004827 GO:0003700|GO:0006355
Vivi1177g00002 322 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 160 319 IPR044280 GO:0000981|GO:0045944
Vivi1177g00002 322 Pfam bZIP transcription factor 243 304 IPR004827 GO:0003700|GO:0006355
Vivi1177g00002 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 249 264 IPR004827 GO:0003700|GO:0006355
Vivi1177g00002 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 244 307 IPR004827 GO:0003700|GO:0006355
Vivi1177g00002 322 CDD mRING-HC-C4C4_CesA 34 84 - -
Vivi1177g00002 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 108 IPR013083 -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 229 268 - -
Vivi1177g00002 322 FunFam Transcription factor HY5 265 306 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 90 108 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 188 202 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 159 268 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 212 226 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 1 23 - -
Vivi1177g00002 322 MobiDBLite consensus disorder prediction 88 146 - -
Vivi1177g00002 322 Coils Coil 241 310 - -
Vivi1177g00002 322 CDD bZIP_HY5-like 247 298 - -
Vivi1177g00002 322 Pfam Zinc-binding RING-finger 26 103 IPR027934 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1177g00002 3 189 Glycosyltransferase AT4G32410 57.979 2.53e-57 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1177g00002 zf-UDP 7.1e-36 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1177g00002 K10999 - aprc:113855639 524.242