Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1172g00010 ATGGAGTTTCTTCTTTTCCTCTTTTTAGCTTCTCTTCTTATCTTCAATACAATAATTGCAGATCAAATTACTAAGCCTTATGTTGTTTATATGGGAAATCCAATTTCATCACCAAACAACATTGATGTAGATGATGGACAAATACCTGAATCAGTTCATCTTCAGTTACTATCATCATTCATTCCAAGTGAAGAAAGTGAGAGGGTAAAACTTATTCATCATTATAGTCATGCTTTTAGTGGATTTTCTGCCATGCTTACAGAGAATGAAGCTTCTGCATTATCTGGACACGATGGTGTGGTGTCAGTGTTCCCAGATCCAATTTTAGAATTGCATACAACAAGATCTTGGGATTTTTTAGATTCAGATTTGGGAATGAAACCTCCTGTCACTACTTCCCAACATTCATCAAATGATATAATCATTGCTCTCATTGACACAGGGATATGGCCAGAGTCACCAAGTTTCAGAGATGAGGGTATAGGCAAGATTCCCTCAAAATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAATCTAATTGCAACAGGAAACTGATAGGTGCGAGATACTACAATACACAAGATGCTTCAAATAGCAACAAGACTCATATTGAAGGAGCCAAAGGTTCACCAAGAGATTCTGTTGGACATGGAACTCACACTGCATCAACAGCAGCCGGTGTATTCGTGAACAATGCTAGTTATTATGGTTTAGCAAAAGGAACATCAAGAGGTGGTTCACCTTCTACTAGAATTGCAGCCTATAAAACATGCTCAGAAGAAGGTTGTTCAGGTTCGATGATACTAAAAGCTATGGACGATGCTATCAGAGATGGAGTAGATATAATCTCGATCTCTATTGGACTTAGCTCGCTAATGCAATCGGATTATTTGAATGATCCAATAGCCATTGGAGCATTTCATGCTGAAGAAAGAGGGGTTATGGTGGTGTGTTCAGCTGGGAATGATGGTCCTGATCCTTATACTGTTGTGAACACAGCACCATGGATATTTACAGTTTCGGCTTCTAATATTGATAGGAACTTTCGGTCGACCGTTGTCCTTGGAAATGGGAAAGCTTTCCAAGGCGCTGGCATTAACTTCTCAAACCTTACTCGCTCAACAATGCATTCTCTAGTCTTTGGAGAGGAAATTGCTGCCAAATTCGCGCCAACATCAGAAGCTAAGAACTGTTATCCTGGATCACTAGATTATACCAAAGTAGCAGGCAAAATTGTTGTTTGTGTTAACGATGACCCGAATATTTCAAGGCGAATCAAGAAGCTAGTTTTACAAGATGCAAGAGCCATAGGGATGATACTAGTCGACGAGAATAATAGAGATGTTTCCTTTGATGCAGGTGCATTTCCTTTCACAGAGATTGGAAATGTTGAATGGCATCAGATCCTTCAGTACATAAACTCTACCAAGAATCCAACCGCAACAATTCTTCCAACAACAGAAGTTCCTAGATATAGGCCTGCACCAATTGTTGCATCCTTTTCTTCCAGAGGTCCTTCTAGCCTTACAGAAAACATTCTCAAGCCTGATGTCATGGCTCCAGGAGTTGCCATTTTGGCTGCCATGGTTCCCAAAACTGATGAACCAGGAAGTGTTCCAATTGGAGAAAAGCCGTCCTTATTTGGCATAAAATCAGGTACATCTATGGCATGCCCACATGTGACAGGTGCTGCAGCATTCATCAAATCAGTACATGGCAGATGGAGTCCTTCAATGATCAAATCAGCATTAATGACAACAGCTACAACATACAATAACATGAAGAAGCCGGTGACCAACAGCTCAAACTACAATGCCAACCCACACGAAATGGGAGTCGGAGAAATCAATCCACTCAAAGCTCTCAACCCCGGTTTAGTCTTCGAAACAAATATCCAAGACTACATCAGATTCCTTTGTTATTATGGCTACTCAAAGAAAATCATTAGCTCAATATCTAAAACCAATGTAACTTGCCCAAAAGCCTCTCAAGATCTTATATCCAACATCAACTACCCTTCAATCTCTATACAAACCCTTAAAAGAAATCAAAAAGTAAAAGTGATCACAAGAACAGTCACCAACGTGGGAGCCTTAAATGTCACATATGTTGCAAAGGTGCATGCACCAGAAGGAATGATTGTTAATGTCTTCCCTAACAAACTTGTTTTTTCAGAGAATGTTGAAAGAATTACCTATAAAGTGTCATTTTATGCCAAGGAATCTCATGGTGGATATAATTTTGGGTCTATAACATGGCTTGATGGTCGACACTATGTTCATACAGTATTTGCAGTCAAAGTTGAATAA 2316 0.3959 MEFLLFLFLASLLIFNTIIADQITKPYVVYMGNPISSPNNIDVDDGQIPESVHLQLLSSFIPSEESERVKLIHHYSHAFSGFSAMLTENEASALSGHDGVVSVFPDPILELHTTRSWDFLDSDLGMKPPVTTSQHSSNDIIIALIDTGIWPESPSFRDEGIGKIPSKWKGVCMEGHDFKKSNCNRKLIGARYYNTQDASNSNKTHIEGAKGSPRDSVGHGTHTASTAAGVFVNNASYYGLAKGTSRGGSPSTRIAAYKTCSEEGCSGSMILKAMDDAIRDGVDIISISIGLSSLMQSDYLNDPIAIGAFHAEERGVMVVCSAGNDGPDPYTVVNTAPWIFTVSASNIDRNFRSTVVLGNGKAFQGAGINFSNLTRSTMHSLVFGEEIAAKFAPTSEAKNCYPGSLDYTKVAGKIVVCVNDDPNISRRIKKLVLQDARAIGMILVDENNRDVSFDAGAFPFTEIGNVEWHQILQYINSTKNPTATILPTTEVPRYRPAPIVASFSSRGPSSLTENILKPDVMAPGVAILAAMVPKTDEPGSVPIGEKPSLFGIKSGTSMACPHVTGAAAFIKSVHGRWSPSMIKSALMTTATTYNNMKKPVTNSSNYNANPHEMGVGEINPLKALNPGLVFETNIQDYIRFLCYYGYSKKIISSISKTNVTCPKASQDLISNINYPSISIQTLKRNQKVKVITRTVTNVGALNVTYVAKVHAPEGMIVNVFPNKLVFSENVERITYKVSFYAKESHGGYNFGSITWLDGRHYVHTVFAVKVE 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1172g00010 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 112 IPR037045 -
Vivi1172g00010 771 CDD PA_subtilisin_like 354 485 - -
Vivi1172g00010 771 Gene3D - 348 492 - -
Vivi1172g00010 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Vivi1172g00010 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 764 IPR045051 -
Vivi1172g00010 771 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Vivi1172g00010 771 CDD Peptidases_S8_3 109 591 IPR034197 -
Vivi1172g00010 771 ProSiteProfiles Serine proteases, subtilase domain profile. 116 624 - -
Vivi1172g00010 771 Pfam Fibronectin type-III domain 671 768 IPR041469 -
Vivi1172g00010 771 FunFam subtilisin-like protease SBT1.5 348 491 - -
Vivi1172g00010 771 Pfam Subtilase family 138 598 IPR000209 GO:0006508|GO:0008236
Vivi1172g00010 771 Gene3D Peptidase S8/S53 domain 139 637 IPR036852 GO:0004252|GO:0006508
Vivi1172g00010 771 Gene3D - 641 770 - -
Vivi1172g00010 771 SUPERFAMILY Subtilisin-like 111 628 IPR036852 GO:0004252|GO:0006508
Vivi1172g00010 771 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vivi1172g00010 771 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Vivi1172g00010 771 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Vivi1172g00010 771 MobiDBLite consensus disorder prediction 199 220 - -
Vivi1172g00010 771 FunFam Subtilisin-like protease SBT1.5 139 370 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1172g00010 27 768 Subtilisin-like Serine Gene Family AT1G20150 44.299 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1172g00010 K25898 - gmx:100809885 1221.45