Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1172g00009 ATGGCTGGGCAAGCTTCGTTTTTCTACGATGTGTTCCTGAGCTTCAGAGGTGATGATACGCGATATGGTTTTACCGGAAATCTCCACACTGCTCTTCATCAAAGAGGAATCCAAACGTTCTTTGACGATCACGATATTCCAAAAGGTGAAGAATTAACTTCATCACTTGTTAAGGCTATTAAAGATTCCAGGATCGCCATCGTTGTGTTTTCTAAGAACTATGCTTTTTCCAAGTTTTGCTTGAAGGAACTCACCGAGATACTAGACTGCTATGAGGAGAAGAAGAAGAAGAAGAATGGTCGAATGGTTTTACCTGTTTTTTATAAAGTGAATCCTTCTGATGTTCGATACGGTAGAGGAAGTTACGGAGAAGCACTGGCTAAGCACGAGGAGGCGTTTAAGGATGACCTGGAGATGGTTAACAAATGGAGGACTTCACTACACAAAGCTGCTAATCTCAAAGGCTTTCATTTCAAACATGGGGAGGTATATGAATATCAATTAATTTCCAGTATATTTAAGGAAGTCTCACTCAAGATTAATCGTACACTTTTACATGTTGCCAATTATCCTGTTGGATTGGAGTCTAGAGTGGATAAAGTAAACTCACTTCTCAACATTCCGTCGAATGATGTAGATTTCCACATGGTAGGCATCCATGGTATTGGTGGAATTGGTAAAAGTACTGTTGCTCGATCAGTATATAATTCGATTAGTGACAAGTTTGAAGGTTTTTGTTGTTTTCTTGAAGATGTGAGAGTGAGTTCGCATAAATATGGCTTATTAAATCTCCAAGAGACGGTTCTTTCTGAGATACTTGGAGACAAGAAAATCAGGTTGGGCAATGTGCGGAATGGAATGTCAATAATAGAACAAAAGCTCTCCAATAAAAAGGTTCTTTTGGTTCTTGATGATGTTGACCAAAAAGAGCAGTTACAGGCTATTGTTGGATCACCTAATTGGTTTGGTTCTGGTAGCATCGTAATCATTACAACTCGGGACAAAGATTTACTAACACATTATGAGGTTAAAAGTAAACTATATGAGGTGGAGGAACTGAACGACAAAGAAGCCTGTGAATTGCTTAGTTGGAATGCTTTCAAAACTGACAAAGCTGATCCAAAGTACACCGACATTTTAAACCGTGCATTGTGTTACGCTTCTCGGCTCCCACTGGCTTTGGAGGTAGTAGGTTCCAACCTGTTTGGGAAAGGAGAAGAAGAATGCAAACTCATATTAGATCGGTATGACAGAATTCCAGATAAAAAGATCCAGGACATACTACGAGTAAGCGTTGATTCCTTGGATAAAGATGACAGGGATGTTTTTCTTGACATTGCTTGTTGCTTCGGAGGATATAAATTGTCTGATGTTGAAAATATACTACATGCTCACCATGGTTCATCAATGAGACGTGGTATTGAGCTGTTGATTGAAAGATCTCTCATAAAGCTTGATGATAGTCTTGTGGCATTACATGAACTGATACAAGACATGGGTAAAGAAATTGTGCGACAAGAATCCAAAGAGCCCAATGAACGCAGTAGGTTATGGAACTTTGGAGACGTAGTCCAAGTTCTAGAAGAAAACATGGGAACTAGCAAAACTCACATGTTAATTCTGGATTTTCCCAAAGATGAAGGACACATGAAAGGATCCAAAGGAGAAGTAGTAAATTGGGATGGAGAGGCCTTCAAGGAAATGAAAAACCTCAAAACTCTTATTATTAGAAATGGCCATTTTAACAAAGGCCCCACGCGTCTTCCAAATAGTTTAAGAGTTTTGAAATGGCATGGATATGCTTCATCATCGTTACCACGTGATTTTCATCCAAGAAAACTGTGCATACTCGAGTTACCTGACAGCTGCTTAAAGCCTTGTGAACCAATCCAGGCATTTGCATATTTGAGAATTTTGGATTTTAGCTACAGTGAGTATATAACTGAGATACCTGATGTATCTGGTCTCCCGGATTTAGAAAAATTGTCATTTAAACATTGTGAGAATTTAACTAAAATTCACGAGTCAGTTGGATATTTGGGAAGTCTTAAGATATTGGATGGTTCTAGTTGCATGAATCTTAATACTTTTCCACCCATCATATTGACCTCTCTCGAACAACTCAATCTTTCACATTGCTCAAATCTTGAGAGTTTCCCAGAAATATTGGGGAGAATGGAAAATATAACAGAACTTCATATAATGGGGAGTCCGATTAAAGAACTACCTTTTTCATTTCAAAACCTCACCCGGCTTCGAAAGTTGGAACTACAAATATGTGGAATGGTTCAGTTACCTAGCTGCATTTTCATGTTGTCAGAACTAAGTTTGATGCATGTTTCAAAATGTGAAGGGTTGTGGTTATCGGGACAGGACAAAGGTAAAGAAATGGCGCTCAAGTCTTCAAATGTGGACCGTCTTATTCTCACTGACTGCAATATATCCAATGACTTCCTTCCAATAGGTCTTAACATTTTTTCCAATGTCAAAGATTTAAACCTATCAGGCAACAATTTCACAACTGTTCATTCATGGATCAAAGAATGTAACTTTCTGAGGAACCTTAAGCTGGATAATTGCAGTAATCTACAAGAAATTAGTGGGATTCCAAAGAAATTAGAAACATTTTCTGTGAAAGGATGCACATCCTTGAAATGCTTGGACCTCACTGTTCTTCCTGCATGCACCGCAGAATCTTGTTCTTTGAAAGAACTGATTTTGGATGACTGTGTGTATCTTCAAGAAATTGCACGGCTTCCACAAAACTTGGACGTGCTCTCTGCAAAAAACTGCACCGCATTAACATCCCAGAGTATAAACATGTTAATGAATCAGAGAGGAGTGCAGGCTGGAAACAAGATGTTTGTTTTCCCCGGAAAAAAAATTCCAGAGTGGTTCAGGCATTGTTTAAGTGTGAAAAAGGCTCATGTCTCAAGAGTGGTTAGAAAACAAGAAATCGCAGGGTCATTTTCTTTCTGGTTTCACAACAAATTTCCTGCAATTTCTCTCTGTCTTGTAATTGGACTGGGGAATGAGCAACCTATCGCGGTCAATTTTAGCCCCCGAGTATTCATCAATGGCCATAAGCAGTGTATTGGCGGTCAGAAGGTTTACAACTTCATCATAGCTACTGATCATGTACTTCTGCTAAACTTTGAAGATAGTGAGGACATAGTGTTTTCAGATAATGAGTGGAATCATGCAGAGGTTTCATATGTTGATCATATTACCAACGATGAGGTGCCAATCAGACAGGTTGTGAGTTATAGTGGAATACATGTATTTGGAGAAACAACCTATCCAGGAAATTTCTGTTTCACCAAACCTCCACAAACAGTGATAAATGCAAATTCGAATCCAAATTCAATGGAGGGGACACAACAAGGAGTTAAGGACACTGAGGAGAGACCTCGGAGAGACCAGACAAAGGTCCAGGCCCAACTTCGACCTCCAATTGCCGCTGTGGCAAAAAAAGATATGGCCTCTAAACTATTAGTTCCGGCTAAGAGGTCTTTGGAGGATGTAGTCGGAGAAACTTCAGAAAGGATTCAAGATGACGAGGTTCATCCTACTACAATTTCAAATGATCATCCTGTCATTCAAAGTTGTCGTGAGGGTGATGATATTGAACTGGAAGGAGTATCCTCTTCTGACTCAGACGATCCCTTTGATCGTGTTGATAGAAGACTCGGTATTAGTGCCGAGGAAACCATTTCTGCTGCATCAAGTTCTGGAGTTGCTTCACTTGGATCAATTAGAGAGGCTATTAACTCATTGGAGCTGTTAATGGCTAAGGACTTATCTGAATTCTCTTGTGATCCTGATACACAGTATGGACTTCATCATCTGTTAGATCTACTGAGTACAAGTAGCCACCCCAAGGTGAGTTTAGAGGTGAAGGAGGCTATTGCAGAGTTCAAGAGAAAGTCCTTTTTATCATTCCAAGAATTCCAATCCACTGTTGAGTCTGTCAACAAGCTGAAGGATTTTGAGAAGCATCTAGATAGAATTCAGCAGGAGAGTATGGCAGGCAAGGGTCAAAGGAAGGAGCTCAAAAGCTCAATAAAAAAGGTTTCTTTGGGCATCAAGGCCGAAAATAGAAGGAAAAAGGAGTCAGATGAAGAAATTTCAACGTTAAGAATGCAACTAGCTAAGAAAGAAAGGGACCTAGAACAACTTGTGCTGAATCTCGAGAATCAAGAGAAATCACTCTCAACATTTTCAACAAATTATGCTTCTCTCAACGAGCAAGCTCGAGCACTCCTAAAAGAAGCCGACGATCTACTGGCTACGAGCTGTTGGGTAAAGCATGAGGGTGAAGCCGCTGAAGTGGAGCAGGATAGGCTCAAGTCCATCTGGTCTATTGGTCTAACCAGCCAGTTTAATGAGATTAAAAAGACCTTTTTTTGA 4410 0.398 MAGQASFFYDVFLSFRGDDTRYGFTGNLHTALHQRGIQTFFDDHDIPKGEELTSSLVKAIKDSRIAIVVFSKNYAFSKFCLKELTEILDCYEEKKKKKNGRMVLPVFYKVNPSDVRYGRGSYGEALAKHEEAFKDDLEMVNKWRTSLHKAANLKGFHFKHGEVYEYQLISSIFKEVSLKINRTLLHVANYPVGLESRVDKVNSLLNIPSNDVDFHMVGIHGIGGIGKSTVARSVYNSISDKFEGFCCFLEDVRVSSHKYGLLNLQETVLSEILGDKKIRLGNVRNGMSIIEQKLSNKKVLLVLDDVDQKEQLQAIVGSPNWFGSGSIVIITTRDKDLLTHYEVKSKLYEVEELNDKEACELLSWNAFKTDKADPKYTDILNRALCYASRLPLALEVVGSNLFGKGEEECKLILDRYDRIPDKKIQDILRVSVDSLDKDDRDVFLDIACCFGGYKLSDVENILHAHHGSSMRRGIELLIERSLIKLDDSLVALHELIQDMGKEIVRQESKEPNERSRLWNFGDVVQVLEENMGTSKTHMLILDFPKDEGHMKGSKGEVVNWDGEAFKEMKNLKTLIIRNGHFNKGPTRLPNSLRVLKWHGYASSSLPRDFHPRKLCILELPDSCLKPCEPIQAFAYLRILDFSYSEYITEIPDVSGLPDLEKLSFKHCENLTKIHESVGYLGSLKILDGSSCMNLNTFPPIILTSLEQLNLSHCSNLESFPEILGRMENITELHIMGSPIKELPFSFQNLTRLRKLELQICGMVQLPSCIFMLSELSLMHVSKCEGLWLSGQDKGKEMALKSSNVDRLILTDCNISNDFLPIGLNIFSNVKDLNLSGNNFTTVHSWIKECNFLRNLKLDNCSNLQEISGIPKKLETFSVKGCTSLKCLDLTVLPACTAESCSLKELILDDCVYLQEIARLPQNLDVLSAKNCTALTSQSINMLMNQRGVQAGNKMFVFPGKKIPEWFRHCLSVKKAHVSRVVRKQEIAGSFSFWFHNKFPAISLCLVIGLGNEQPIAVNFSPRVFINGHKQCIGGQKVYNFIIATDHVLLLNFEDSEDIVFSDNEWNHAEVSYVDHITNDEVPIRQVVSYSGIHVFGETTYPGNFCFTKPPQTVINANSNPNSMEGTQQGVKDTEERPRRDQTKVQAQLRPPIAAVAKKDMASKLLVPAKRSLEDVVGETSERIQDDEVHPTTISNDHPVIQSCREGDDIELEGVSSSDSDDPFDRVDRRLGISAEETISAASSSGVASLGSIREAINSLELLMAKDLSEFSCDPDTQYGLHHLLDLLSTSSHPKVSLEVKEAIAEFKRKSFLSFQEFQSTVESVNKLKDFEKHLDRIQQESMAGKGQRKELKSSIKKVSLGIKAENRRKKESDEEISTLRMQLAKKERDLEQLVLNLENQEKSLSTFSTNYASLNEQARALLKEADDLLATSCWVKHEGEAAEVEQDRLKSIWSIGLTSQFNEIKKTFF 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1172g00009 1469 Coils Coil 81 101 - -
Vivi1172g00009 1469 ProSiteProfiles TIR domain profile. 7 180 IPR000157 GO:0007165
Vivi1172g00009 1469 Pfam NB-ARC domain 195 404 IPR002182 GO:0043531
Vivi1172g00009 1469 Gene3D - 182 349 IPR027417 -
Vivi1172g00009 1469 Gene3D Ribonuclease Inhibitor 719 948 IPR032675 -
Vivi1172g00009 1469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 768 IPR044974 GO:0006952
Vivi1172g00009 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 446 IPR027417 -
Vivi1172g00009 1469 MobiDBLite consensus disorder prediction 1116 1145 - -
Vivi1172g00009 1469 SUPERFAMILY L domain-like 559 917 - -
Vivi1172g00009 1469 Gene3D - 8 181 IPR035897 -
Vivi1172g00009 1469 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 182 - -
Vivi1172g00009 1469 Gene3D Ribonuclease Inhibitor 536 718 IPR032675 -
Vivi1172g00009 1469 Gene3D - 352 436 IPR042197 -
Vivi1172g00009 1469 PRINTS Disease resistance protein signature 293 307 - -
Vivi1172g00009 1469 PRINTS Disease resistance protein signature 700 716 - -
Vivi1172g00009 1469 PRINTS Disease resistance protein signature 387 401 - -
Vivi1172g00009 1469 PRINTS Disease resistance protein signature 216 231 - -
Vivi1172g00009 1469 Coils Coil 1362 1431 - -
Vivi1172g00009 1469 Pfam TIR domain 9 176 IPR000157 GO:0007165
Vivi1172g00009 1469 MobiDBLite consensus disorder prediction 1129 1143 - -
Vivi1172g00009 1469 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 156 IPR035897 -
Vivi1172g00009 1469 SMART till_3 8 153 IPR000157 GO:0007165
Vivi1172g00009 1469 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1172g00009 9 783 WRKY Transcription Factor Family AT4G12020 29.743 1.02e-72 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1172g00009 - - mtr:25501119 1781.92