Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1172g00008 ATGGCTTTACGAGATTCCTCTACCTACAAACACGACGTGTATCTCAGCTTCAGAGGCGAAGATACACGATTCAGTTTCACTTCCCATCTCACCGCTGCTCTCAATCAAAGAGGGATCCGCACCTTCGCTGACGACGGCGTGCTTCTCAAAGGAGATGGTCCCAGTCGATCACTTTTGAAGGCAATACAAGAATCCAGGATTTCCATAGTTATTTTCTCTAACAACTACGCTTTTTCTAGCTGGTGCTTGGAAGAACTCACCGCCATCCTAGATTGCTACGAGGAGAAGAAGAATAATGGCAGTGTGGTTTTACCTGTTTTTTATGAAATGGATCCTTCTGATGTTCGACACGGGAGAGCAAGTTACGGAGAAGCACTGGCTAAGCATGAGGAGAGGTTCGTCAAGGAGAAAGTCCAAAAATGGAGGATGGCTCTACACAATGCAGCTAACCTCAGTGGCTTTCATTTCGGGAAGGGTGGATACGAATATAAATTTATTGAGAGTATCGTTAAGGAAATCTGTAGCATGGTTTCTCGTGTTTCTTCACGTGTTTCTTTACGTGTTGCGGATTACCCTGTTGGATTGGAGTCTCGAGTGGATAAAGTAAAATCACTTCTGAATCTTGAGTCTGATGATCTAGTCCAGATGGTAGGCATCCATGGGATCGGTGGAATTGGTAAAACTACAATTGCTCTAGGAGTATATAATTCAATTGGTGGCCAGTTTGAAGGTCTGTGTTTTCTCGAGGATGTACGAGAGAATTCAATGAAATTTGGGTTAATACATCTTCAAGAGATTGTTCTTTCTAAGATATGTGGTGATGGGGATATTGACATACAAAATGTGAAACAAGGAATTTCAACGATGAGGAAAAGGCTATGCCGAAAAAAGGTTCTATTGGTTCTCGACGATGTTGACAAAATGGAGCAGCTTCAAGCTATTGCAGGAGCATCCGATTGGTTTGGTCCTGGCAGCAGAGTCATCATTACAACCCGGGACAATAATTTGCTAGCAAAACATGACGGTGGATTTGGATTTGGAAGAACCTATGAGGTAGAGGAATTAAGTGAAAAAGAAGCTCTTGCTCTTCTTAGTTGGAATGCTTTCAAGACCGACAAAGCAGTTGATCGAAGCTATGCACACGTTTTAAATCGTGCATTAACCTATGCTTCTAGGCTTCCACTGGCTTTGCAAGTATTGGGCTCCTACTTGTTTGGAAAACGTATAGACGAATGGAATGATGCATTGGATGAGTATGAAAAAATTCCTGATAAAAATATCCTAAGGGTACTCAAAATAAGCTTTGATTCCTTGGAGGAAGAAGAGCGGAGAATTTTTTGTGATATTGCTTGTTTCTTCAATGGACATAAGTTGGTAGAAGTGGAAGACATACTCGGGGCTCATTATGCTTTATCTGTGAAAAATAGTATAACAGTGTTGATTGAAAGATCTCTCATAAAGATTGATGACGGTCTTGTCACATTACACGACTTGATACAAGACATGGGTAGAGAAATTGTCCGACAGGAATCACCAGATGTGCCTGGGAAACGAAGTAGGTTATGGCTTCCACAAGATGTTGTTCAAGTTTTACAAGATAAATCTGGTTCTAATACAGTTGAAAGCTTATTACTGGATTTCCCCAAAGATGGAATAAACTCGAGTGGTGAAGAAGTAAACTGGGATGGAGAGGCCTTAAAAAAGATGCAAAACCTCAAAACACTCATTATTAGAAATGTTCGTCTTAACAAAGGCCCCACACATCTTCCCAATTGTTTAAGAGTGTTGGAATGGTCGGGGTATCCTTCATCGTCATTACCAGTTGGTTTTCATCCAAAGAAACTGGTGATACTCAAGTTGTCCGAGAGTCGCCTAAGGATAAGTGAACCAATTCAGGGTTTCAAAAGTCTGACAGTTTTGGATTTCAGCTACTGTGAATGGATAACTCATATATCTGATGTATCTGGCCTCCCAAATTTAGAAAAAATATCTTTAAAACATTGTGAAAGTTTAACACAGATTCACGAATCAGTCGGACTTCTGGAAAAACTTAGAATATTGGATGTTGTTCATTGCAAGAAGCTCAGTGCTTTACCGCCCATCAGATTGACCTCTCTTGAACAACTCAATCTTTCACATTGCTCGGCTCTTGAGAGTTTCCCAGAAATATTGGGGAAGATGGAAAACCTAACAGAGCTTCATATAATGGCAAGTCCCGTAAAAGAATTACCATTTTCAATTCAAAACCTTACACGGCTTCGAAAATTAGAACTACACATCTGTGGAACGATTCAGTTACCAAGTAGCATTGCCATGTTGGCAGAACTTAGTTTGATGCGTGTTTCAAAATGCCAAAGGTTGTGTTTATCCAAACCGGACACTGGTGAAAAATTGGAGTCCAAGTCATCAAAGACAGAACATCTTATTCTGTCATATTGCAACATATCAGATGACTTACTTCCAATAGGTCTTACTTGGTTTTCCAATGTGAAAGATTTGGATCTCTCGGGGAATAATTTTGAAATTCTTCATGCGAGTATCAAAGAGTGTCTCTTTCTTAGGAACCTTAAGCTGGATGATTGCAAGAATATACAAGAAATTAAAGGGCTACCATGGAAACTAGAATCATTTTCTGCACAAGGATGCACATCCTTGAAATACTTGGACTTCACAGGACAATGTCCCTCTTCGATACGAGAGCTTATTTTGGATGGTTGCTCATTTTTAAAACAAGTTATAGGGGTTCTGCCAAATTTGGAAAGCTTCTCTGCAAAAAACTGCACATCATTGTCTACAAGCATGTTTGTGAATCAGGAATCAGTAGAAGCCGGAAACAAGATGTTTTCGTTACCAGGAACAAAAATTCCAGATTGGTTTACACACCGTGTAAATGGAGGATCAATATCTTTTTGGTTTCGCAACAAATTTCCAGTAATTTCTCTCTGTCTTGTTATCGAATCGATGGGTGAGCAAGCTATCACCATAAAGTTTAGCCCCAGAGTGTTCATCAATGGCAATAAAAAGTCCCTTGGAAATCGGAAAGTCCACGAGTTCAGAATAGCAACAGATCACATACTTTTGTTTGACATACGTCTGCTAAAATTTGAAGATAAAGAGGATGTAGTCTATTCATACAATAGCTGGAATCATGTGTTGGTTTCATATGCAGATCATATTAACAACAACGGGGTCCCAATCAAAGGGGTTGCCAAATATAGTGGAATACATGTATATGAACAATACAGTTCTATGGCAAATATCCGATTCAACAATCCCCCACAGTCGTTACTAAGTGTGAATTCGAATACAAATTCAATGGAAGCACACCAAAGAGGCCAGATCGCAGCAGGTAGACACCAGAAAGACCAGACAGAGAATTTATCTTCACTCATTCTCTCATCGACCCAACTTGAACCTGCAATTACTGACGCGAAAAATGGTCCAGGCCCTAAACCAACACTTCCAGCTAAGAGGTCTTTGGAAGGTGTCACAAGAGAAGCTTCAGGGAGACTTCCAGAGGAGGATACTCATCCTACGACTATTTCATATATCCCTCCCATCATTCAAAATTGTCGCGTGGGTGATGATATTGAACCAGAAGCAGTATCTTCGTGTGAACTTGAATCTGAAGAATCCTCTTCATCTGAAGGTTCTGACTCAGATGATCCCTTTGACCGTGTTGATAGAAGACTCGGTATTAGTGCCAAGGAAACCATATCGTCCGCATCACGTTCTCGGGATGCTTCATTTGGATCAATTAAAGAGGCTATTAGATCCTTGGATGGATTAATGGTTAAGGACTTATCTGAAGTCTCTTCTGATCCTGATGCACAGTCTGGACTTGGTCAATTGTTGGATGTACTGAGTACAAGTAGCCACCCCAAGGTTACTTTCGAGGTGAAGGAAGCTATTGTGGAGTTCAAGAGAAAGGCCTTTTTATCATTTCAAGAATTCCAATCTGCTGCCGAGTCTGTCAACAAACTGAAGAATTTTGAGAGGCATCTGGATAGAATTCAGCAGGAGACTCTTGCAGGCAAGGGTCAAAGGAAGGACCTCAAAAGCTCGATAAAAAAGGTTTCTTTGGGAATCAAATCTGAAAATAGGAGGAAGAAGGAGTTAGAGACAGAAATTGCAACTTTAAGAATACATCTATCTACCAAAGAAAGAGACCATGAACAACTTGTGCTGAATCTCAAGAATCAGGAGGAAACACACTCAACCTATTCAACAAGTTATGCTTCTATCAACCATCAAGCTATAGCACTATTAAAGAAAGCTGATGACTTACTTGCTGCGAATAGTGGAGTAAAGCATGAGGGTAAAGCTGCTGAAGTGAAGCAGAGTATGCTCAAGTCTACCTGGTCTTTTGACCTCGCTAATCTGTTCAATAAGATTAAAAATAATATTGATACTGACCTTTTATGA 4425 0.4029 MALRDSSTYKHDVYLSFRGEDTRFSFTSHLTAALNQRGIRTFADDGVLLKGDGPSRSLLKAIQESRISIVIFSNNYAFSSWCLEELTAILDCYEEKKNNGSVVLPVFYEMDPSDVRHGRASYGEALAKHEERFVKEKVQKWRMALHNAANLSGFHFGKGGYEYKFIESIVKEICSMVSRVSSRVSLRVADYPVGLESRVDKVKSLLNLESDDLVQMVGIHGIGGIGKTTIALGVYNSIGGQFEGLCFLEDVRENSMKFGLIHLQEIVLSKICGDGDIDIQNVKQGISTMRKRLCRKKVLLVLDDVDKMEQLQAIAGASDWFGPGSRVIITTRDNNLLAKHDGGFGFGRTYEVEELSEKEALALLSWNAFKTDKAVDRSYAHVLNRALTYASRLPLALQVLGSYLFGKRIDEWNDALDEYEKIPDKNILRVLKISFDSLEEEERRIFCDIACFFNGHKLVEVEDILGAHYALSVKNSITVLIERSLIKIDDGLVTLHDLIQDMGREIVRQESPDVPGKRSRLWLPQDVVQVLQDKSGSNTVESLLLDFPKDGINSSGEEVNWDGEALKKMQNLKTLIIRNVRLNKGPTHLPNCLRVLEWSGYPSSSLPVGFHPKKLVILKLSESRLRISEPIQGFKSLTVLDFSYCEWITHISDVSGLPNLEKISLKHCESLTQIHESVGLLEKLRILDVVHCKKLSALPPIRLTSLEQLNLSHCSALESFPEILGKMENLTELHIMASPVKELPFSIQNLTRLRKLELHICGTIQLPSSIAMLAELSLMRVSKCQRLCLSKPDTGEKLESKSSKTEHLILSYCNISDDLLPIGLTWFSNVKDLDLSGNNFEILHASIKECLFLRNLKLDDCKNIQEIKGLPWKLESFSAQGCTSLKYLDFTGQCPSSIRELILDGCSFLKQVIGVLPNLESFSAKNCTSLSTSMFVNQESVEAGNKMFSLPGTKIPDWFTHRVNGGSISFWFRNKFPVISLCLVIESMGEQAITIKFSPRVFINGNKKSLGNRKVHEFRIATDHILLFDIRLLKFEDKEDVVYSYNSWNHVLVSYADHINNNGVPIKGVAKYSGIHVYEQYSSMANIRFNNPPQSLLSVNSNTNSMEAHQRGQIAAGRHQKDQTENLSSLILSSTQLEPAITDAKNGPGPKPTLPAKRSLEGVTREASGRLPEEDTHPTTISYIPPIIQNCRVGDDIEPEAVSSCELESEESSSSEGSDSDDPFDRVDRRLGISAKETISSASRSRDASFGSIKEAIRSLDGLMVKDLSEVSSDPDAQSGLGQLLDVLSTSSHPKVTFEVKEAIVEFKRKAFLSFQEFQSAAESVNKLKNFERHLDRIQQETLAGKGQRKDLKSSIKKVSLGIKSENRRKKELETEIATLRIHLSTKERDHEQLVLNLKNQEETHSTYSTSYASINHQAIALLKKADDLLAANSGVKHEGKAAEVKQSMLKSTWSFDLANLFNKIKNNIDTDLL 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1172g00008 1474 MobiDBLite consensus disorder prediction 1105 1125 - -
Vivi1172g00008 1474 Pfam TIR domain 10 175 IPR000157 GO:0007165
Vivi1172g00008 1474 Gene3D Ribonuclease Inhibitor 537 719 IPR032675 -
Vivi1172g00008 1474 MobiDBLite consensus disorder prediction 1201 1226 - -
Vivi1172g00008 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Vivi1172g00008 1474 Gene3D - 354 439 IPR042197 -
Vivi1172g00008 1474 SUPERFAMILY L domain-like 558 910 - -
Vivi1172g00008 1474 Gene3D - 180 342 IPR027417 -
Vivi1172g00008 1474 SUPERFAMILY "Winged helix" DNA-binding domain 426 532 IPR036390 -
Vivi1172g00008 1474 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Vivi1172g00008 1474 Pfam C-JID domain 950 1057 IPR045344 -
Vivi1172g00008 1474 Coils Coil 1321 1341 - -
Vivi1172g00008 1474 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 774 IPR044974 GO:0006952
Vivi1172g00008 1474 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 179 - -
Vivi1172g00008 1474 Gene3D Ribonuclease Inhibitor 720 943 IPR032675 -
Vivi1172g00008 1474 SMART till_3 10 151 IPR000157 GO:0007165
Vivi1172g00008 1474 ProSiteProfiles TIR domain profile. 9 177 IPR000157 GO:0007165
Vivi1172g00008 1474 MobiDBLite consensus disorder prediction 1140 1183 - -
Vivi1172g00008 1474 Pfam NB-ARC domain 196 420 IPR002182 GO:0043531
Vivi1172g00008 1474 PRINTS Disease resistance protein signature 216 231 - -
Vivi1172g00008 1474 PRINTS Disease resistance protein signature 390 404 - -
Vivi1172g00008 1474 PRINTS Disease resistance protein signature 292 306 - -
Vivi1172g00008 1474 PRINTS Disease resistance protein signature 701 717 - -
Vivi1172g00008 1474 Coils Coil 1356 1404 - -
Vivi1172g00008 1474 Gene3D - 5 179 IPR035897 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1172g00008 4 833 WRKY Transcription Factor Family AT4G12020 30.338 2.34e-80 291