Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1171g00011 ATGGAAAAAATTAAGGACATCAACGACACCAAGGAGTTGTGGAAAGTGGCGGTGAGAGTTTCTCATAAATGGAACGTCGTCTCCAACAACAAGGAGCATTTTGAAATGATCTTTCAAGACAAAGAGGGTTCTGATATCCACGTCATTGTTCCAACTGCATGCATGGCCGCATACACTGAGAAGTTTGAGGTGGACCGGACTTATACTGTGTCAAATTTTTCTGTGCAGCCTAATAACTTAGTTTTCAAACCAAGCTCCCACAAGTTCTTAGTCAAATTTACTGGAGGAACTGCTGTTGGTGATGTTGACAAACACGACATACCCCCCAAACCACGTCCATTCACCAGTTTCGCTGATATCATTAACGGGAACTTTCAGAAGAATGTCCTCATTGATGTTATTGGTATGCTTGAGAGTATTGGGTATCAACAGACGCAAATAGGTGGGAAAAAATTTCAGGCTAATTTCCTATTACGAGATGCAAGCAACAACACCATTAATTGTACCCTCTGGGAAGACTATGCTAAACAGTTTTTTAAGTTTAACGAGGACAACTCTGCGACAACTGGGCCAGTTGTTATTATGATTCAGTATGCAAAAGTTAAAGAAGCTGGCCATTACCCTCTCTCTGTTACCAACACATTCCATGTTACTAAGCTTCTGATCAATGCAGATTTGCCGACTGTCAAGGACTTCCTTAACAGATTCCCAAAGGATTCGTTGCCTGTCGTTTCCACACAACTCACCTCTCAGTCTCAACAATACTCCCGCACATCGACAAATGATAATGTCGGACAAAGTCAGATGCAGAAGTTACTCAGAGGGGCTGTTGCTGTGCCACTAAGTGAGATGAAGAAAATCCGCGAGGTGCCGTTACGCAATTCTGAATTATATCGTTGA 900 0.4233 MEKIKDINDTKELWKVAVRVSHKWNVVSNNKEHFEMIFQDKEGSDIHVIVPTACMAAYTEKFEVDRTYTVSNFSVQPNNLVFKPSSHKFLVKFTGGTAVGDVDKHDIPPKPRPFTSFADIINGNFQKNVLIDVIGMLESIGYQQTQIGGKKFQANFLLRDASNNTINCTLWEDYAKQFFKFNEDNSATTGPVVIMIQYAKVKEAGHYPLSVTNTFHVTKLLINADLPTVKDFLNRFPKDSLPVVSTQLTSQSQQYSRTSTNDNVGQSQMQKLLRGAVAVPLSEMKKIREVPLRNSELYR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1171g00011 299 CDD RPA1_DBD_B_like 132 237 - -
Vivi1171g00011 299 Pfam Domain of unknown function DUF223 35 130 IPR003871 -
Vivi1171g00011 299 SUPERFAMILY Nucleic acid-binding proteins 3 99 IPR012340 -
Vivi1171g00011 299 Gene3D - 1 100 IPR012340 -
Vivi1171g00011 299 CDD RPA1_DBD_A_like 15 99 - -
Vivi1171g00011 299 Gene3D - 105 241 IPR012340 -
Vivi1171g00011 299 SUPERFAMILY Nucleic acid-binding proteins 113 240 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1171g00011 4 274 Core DNA Replication Machinery Family AT2G06510 21.908 8.83e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1171g00011 - - vvo:131639369 527.324