Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1170g00018 ATGGGGAAAAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAATCGAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAACTGCAGACTTCGGACCCGTCCTTAGAAGATACAGCACCGCCTCTTCCTCCACCGGAAGATGTTAAATTAACTGATATTGAAAACCAAAACAATCATCGTGTTCCTGAAATTACAACTGCTGTGGTTACTGAGGAACCTGGTCCTTCTGTTCCGGCACCAGTTGTTAGGACTCAAGCTTCTGTAGTTGCTCGTTTTGCTGGTAAACCAAAGGATGAAGTGGCGGCAATCAAGATTCAAACAGCTTTTCGTGGATACTTGGCACGAAGAGCGTTGCGGGCTTTAAGAGGGTTGGTCAGATTGAAAACATTGATGGAAGGGCCAATTGTAAAACGCCAAGCCATGAGTACACTCCGCTCAATGCAGACGTTAGCTCGTGTGCAAGCTCAGATTCGTACCAGGAGGGTCAGAATGTTAGAGGAGAATCAGGCTTTGCAGAGACAGCTCTTACAGAAGCATGCAAGAGAGCTCGAGACCATGCGGATTGGAGAGGAATGGGATGATAGCCTACAATCAAAAGAACAAATTGAAGCCAAGTTAATGAGCAAGTACGAGGCTACTATGAGAAGGGAAAGAGCAATGGCTTATGCATTCACTCATCAGCAAAACGGGAAGAACTCATCTCGACCTATGAATCCAATGTTTGTGGATCCAACCAATCCTACGTGGGGCTGGAGCTGGCTTGAACGATGGATGGCTGCTCGACCTTGGGAGAGCCGTGGCCTTATGGATAAAGAACTGAATGACCATTCATCTGTTAAAAGTTCGAGCCGTGGCATTACAGGTGGAGAAATCAGCAAATCATTTGCCCGTTTCCAGCTGAATTCCGAAATACATTCTCCAGCAGCCAGCCAACACCCAGGCTCGCCTAGCTTTCAATCAAATTCAACAACTCCTAAGCCAGCTTCTGCATCAGTTGCAAGGAAACTGAAGAAGGCAAGTCCAAAGGGAAGCTGGGTTATGGAAGAAGACTCCAAAAGCATGGCCAGTGTACAGTCAGATCGATTTCGTAGACACTCAATTGCTGGGTCGTCAGTTAGGGATGACGAGAGTCTTGCTAGCTCTCCATCAGTTCCAAGTTATATGATACCAACTCAATCTGCGAAAGCTAGGTCTAGGACACAAAGTCAGAGTCCATTAGCTAAAGAAAACGGCAAACAAGAGAAAGGGTCCTTCGGGACTGCAAAGAAGCGTCTTTCTTTCCCGGCTTCGCCCGCCAGGCCAAGGCGCCATTCAGGTCCGCCGAAGGTAGAAACCGCCATAAATGCAGAGGTCACTGTGGACAATGGTATGGCCGGTTGA 1401 0.4711 MGKKGNWFSTVKKALSPDSKKSSKSKKKWFGKQKLQTSDPSLEDTAPPLPPPEDVKLTDIENQNNHRVPEITTAVVTEEPGPSVPAPVVRTQASVVARFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGPIVKRQAMSTLRSMQTLARVQAQIRTRRVRMLEENQALQRQLLQKHARELETMRIGEEWDDSLQSKEQIEAKLMSKYEATMRRERAMAYAFTHQQNGKNSSRPMNPMFVDPTNPTWGWSWLERWMAARPWESRGLMDKELNDHSSVKSSSRGITGGEISKSFARFQLNSEIHSPAASQHPGSPSFQSNSTTPKPASASVARKLKKASPKGSWVMEEDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMIPTQSAKARSRTQSQSPLAKENGKQEKGSFGTAKKRLSFPASPARPRRHSGPPKVETAINAEVTVDNGMAG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1170g00018 466 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Vivi1170g00018 466 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Vivi1170g00018 466 Gene3D - 89 133 - -
Vivi1170g00018 466 MobiDBLite consensus disorder prediction 313 466 - -
Vivi1170g00018 466 MobiDBLite consensus disorder prediction 1 54 - -
Vivi1170g00018 466 Pfam Protein of unknown function (DUF4005) 381 442 IPR025064 -
Vivi1170g00018 466 MobiDBLite consensus disorder prediction 313 336 - -
Vivi1170g00018 466 SMART iq_5 104 126 IPR000048 GO:0005515
Vivi1170g00018 466 MobiDBLite consensus disorder prediction 380 417 - -
Vivi1170g00018 466 PANTHER IQ-DOMAIN 5-RELATED 1 437 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1170g00018 1 463 IQD Protein Family AT5G03040 52.381 2.29e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1170g00018 - - gmx:100800080 674.855