Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi116g00007 ATGGATTGGGTACGAGGAGAATCAGTTGGTAGAGGAAGCTTTGCGACTGTTAATCTAGTCTTACCCAAAGGAAGTTCAAATTCCACTCTATTTCCTTCTCCGACAGCAGTTAAAACCTCCGAGGTTTCAACCTCGTATTCTCTCAAAAACGAGAGACATGTTCTCGATCGTTTAGGTTCTTGTCAACAAATCATTCGTTGTTTCGGAGATGATTACACCTTCGAGAATGGCAAAAAGTATTACAACTTATTTCTCGAGTATGCTTCCGCCGGTACTCTCGCCGATCAAGTTAAATTCCACGGTGGCCGGATTCCGGAACAGAATATTCGCGGTTACACCAGGTCAATTGTTGAAGGTCTTCACCATATTCATAGCAATGGATTCGTTCACTGTGACATAAAGCTTCAAAACATTCTTGTATTCCATGATGGTGAAATCAAAATCGCTGATTTTGGTCTTGCGAAAAAATCAGGGGAGGAACAGAGTAGGTTCGAATGCAGGGGAACTCCACTTTTTATGTCGCCGGAATCAGTTAACCACGGGGAGCATGAGTCGCCGGCGGATGTTTGGGCACTTGGATGTGCGGTGGTGGAGATGGTGACAGGAAAACCAGTTTGGAATTTGGAGAAAGATTCATCTATGTGGTCGTTGATGCTTCAAATTGGTGCAGGAGAAGAATCACCGATGATACCAGAAGATTTATCAAAGGAAGGAAAAGATTTTGTAGAGAAATGTTTAGTTAAGGATCCAAGAAAGAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTCATTGAAGAAGTGAAGAATGTTAATGAAGCATCACCAAGAAATCACTTTGATTTCAATGATTGGGTTTCTAGTGTTAGTGATTCGACTCCAAGTTCGCCGGAATCTGAAGAGTCGTGTCAATGGAATTATGATTCTTGTTCTTTTTCCGGCGGGGATCGGCTCCGACAGCTTGTGACGGTTGAAGTCCCGGTGAGTTGGTCGGAAACAGATAGTTGGATTAATGTTAGGTGA 1023 0.4301 MDWVRGESVGRGSFATVNLVLPKGSSNSTLFPSPTAVKTSEVSTSYSLKNERHVLDRLGSCQQIIRCFGDDYTFENGKKYYNLFLEYASAGTLADQVKFHGGRIPEQNIRGYTRSIVEGLHHIHSNGFVHCDIKLQNILVFHDGEIKIADFGLAKKSGEEQSRFECRGTPLFMSPESVNHGEHESPADVWALGCAVVEMVTGKPVWNLEKDSSMWSLMLQIGAGEESPMIPEDLSKEGKDFVEKCLVKDPRKRWTAEMLLNHPFIEEVKNVNEASPRNHFDFNDWVSSVSDSTPSSPESEESCQWNYDSCSFSGGDRLRQLVTVEVPVSWSETDSWINVR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi116g00007 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Vivi116g00007 340 Gene3D Transferase(Phosphotransferase) domain 1 2 310 - -
Vivi116g00007 340 SUPERFAMILY Protein kinase-like (PK-like) 3 300 IPR011009 -
Vivi116g00007 340 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi116g00007 340 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi116g00007 340 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524
Vivi116g00007 340 Pfam Protein kinase domain 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi116g00007 340 CDD STKc_MAPKKK 2 265 - -
Vivi116g00007 340 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 297 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi116g00007 1 340 MAP Kinase Kinase Kinase AT4G36950 53.846 1.73e-121 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi116g00007 Pkinase 3.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi116g00007 - - gmx:100798607 446.817