Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1165g00002 ATGCACATCAGGGTTGTTGACATGTGGATTGTTACAGAAAAAGCAGGGTATCAACACCTAGAGTTGGTTATACAAGATGGAACGGGTGACCAAATACATTTGACAACTAGCCGTTGGGATTTTAAGGATTGGATAGAGCAGATCATAGAGCATGCAACATATTATCTGTATAATGGGGATCCTGTGGTTAATGATGGCCCTTTTAAAGTGTGTTCGAACCCTCTCAAGATTCTCTTTAATGGAGGAATTACTCTCACCAAGGTGGACATACCGGACATCCCACTGCACAAATTCAACTTCCATGCCATTGAAAACTTTCTCAATGGACATTTCAAGCCTGACATGCTCTATGATGTTATTGGTGTCTTGCCAGATGTTGTGAAGACACAAATGGGAGGTGGCGGTAAGAAGTCTTTTACCAATATCACCTTACGTGACGTTGGAGGAAATGCCATTGAGGTTGCTTTATGGGGTGATTTTAGCAAACAATTCATGGACTACACTACTATTGGCAAAAATGTTGGTCCCACAATTATCATTTTGACTCATGCTTGGTGTAAGCCAAATGCAGTATCTGGATTACCAAGTCTATCTAATGCTTGGAATGGCTCGAAACTGCTGATTAACTTAGACCATCCACAAGTGGAAACCTTCAAAACCAATTTTGGAGCAGCTGATTTGTCAAATACATCCAATCTTTCTCTATCACTAACCTGTGATTCATCCATTCAATCCACAAACCAGAATTGGACTAGCCGTAATGAGGTCAGGACTATCCGTGACATTTTTGAAGGAGGAAAGGATTGTTTTGCAACTACTATTGGAACTACCAAACGATTCAAGGCTTCAAGGTTTGGATGGTTTTTTGAGTGTTGTCCAGGATGTAGGACTTCTATCAAGTCGGTTGGAGGGAAAGTTGAGTGTCACTGTGGAGTTAAAGATGTTGAACCAATTACTAAGTTCAAAATAGAAGTTGAAGTTGAATATGATGGCTTTGATGGAACCTTTGTCTTTTGGGATAAGGATTGTGTCCCATATACTAAACTGTCTGCTAAAGAGTTAAGACAGCTCATGATAGCGAATGGAGAAGACAACCCAAAAACATGGCCGACTCAAGTTGACATTTTGTTGAATAAGGAAATGGCGTTCCGTGTCAAATTTCAATCATCTTACAAACAATTTTCAATTGTGACAATACTTAATGAGGATAATGTTTACAACAAACTTAAGAGCTACCTAACCCCGGATGAGCATACCTCAAATGCTCCTGTTTTGGAGGTCTTCAATTCTGATCCAAATGATAATCCAAATGAACCTATTATGACACTTTCTGCTGAAGCTTCGATATCTCCTCAACCTTCGTCTGCTGCAAACCATGCTTGGAGTCCTTCTGCAAGCTCCAGCAGCACACCGGCCAAGAGGGGAGCTATAACAACATCAGTTAATGAGATGATTGAGGCTGAAGATCTGACTCCTAAACAATCTGCTACTAAGGCTAAGCCTGGAAGAAAGATCAAGCATATCAAGAAGGAGTAA 1536 0.4049 MHIRVVDMWIVTEKAGYQHLELVIQDGTGDQIHLTTSRWDFKDWIEQIIEHATYYLYNGDPVVNDGPFKVCSNPLKILFNGGITLTKVDIPDIPLHKFNFHAIENFLNGHFKPDMLYDVIGVLPDVVKTQMGGGGKKSFTNITLRDVGGNAIEVALWGDFSKQFMDYTTIGKNVGPTIIILTHAWCKPNAVSGLPSLSNAWNGSKLLINLDHPQVETFKTNFGAADLSNTSNLSLSLTCDSSIQSTNQNWTSRNEVRTIRDIFEGGKDCFATTIGTTKRFKASRFGWFFECCPGCRTSIKSVGGKVECHCGVKDVEPITKFKIEVEVEYDGFDGTFVFWDKDCVPYTKLSAKELRQLMIANGEDNPKTWPTQVDILLNKEMAFRVKFQSSYKQFSIVTILNEDNVYNKLKSYLTPDEHTSNAPVLEVFNSDPNDNPNEPIMTLSAEASISPQPSSAANHAWSPSASSSSTPAKRGAITTSVNEMIEAEDLTPKQSATKAKPGRKIKHIKKE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1165g00002 511 CDD RPA1_DBD_A_like 1 88 - -
Vivi1165g00002 511 MobiDBLite consensus disorder prediction 448 477 - -
Vivi1165g00002 511 SUPERFAMILY Nucleic acid-binding proteins 256 390 IPR012340 -
Vivi1165g00002 511 Gene3D - 1 89 IPR012340 -
Vivi1165g00002 511 CDD RPA1_DBD_B_like 118 222 - -
Vivi1165g00002 511 Gene3D - 239 413 IPR012340 -
Vivi1165g00002 511 SUPERFAMILY Nucleic acid-binding proteins 98 223 IPR012340 -
Vivi1165g00002 511 MobiDBLite consensus disorder prediction 448 511 - -
Vivi1165g00002 511 Gene3D - 91 231 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1165g00002 26 160 Core DNA Replication Machinery Family AT4G19130 25.532 4.04e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1165g00002 - - vvo:131597380 921.768