Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1152g00008 ATGAGATTCGGAAGGTGTGTGTTTCTTTGGAGCCAAACTTTCATAGTTGTACAAAAAAGACATCATACTAAGTTATTCGCAAACAACCACACGGACAGGAATAATACATATAGTAGTGAAAATATACTGTCTGGAACTGATGTTTATACAAAAATCGATCACCCAACCGAGTTTGATTTTTATCTCTGTAGTCACGCCGGCATCCAGGGGGTGCATCCTTGTGATAAGAGAAGGCACATCACTGAGTACAAGAAAATGTTTCCAGCAATTGATTTTTCACTGATTGAGTCTGATGACGACATTTTGTGGAAACCTGATATTCGAGAGAAGAATGAAGAAGTTGCTGCCAGGGGACTGAAATTTTTGGAATGGTTGTGGACTCATAAAGAAAAAGAGATTGATGTTGTTACTCACAGTGGTTTTCTATTTCATACTCTAAGTGCTTTTGGAAATGATTGCCATCCAAATGTGAAGAGTGAAATCTGCACACACTTTGCTAATTGTGAGCTGCGTTCAGTGGTTATCATCGATAGAGGGATGATTGGATCAAATGAGTCCTCTACCAACTTTCCTGACAAGATTCCACACGGCCTTGACCTTCCCAGTGATGTTGCTGACGAGAAAAATGCTGCGAATGATCTAACTAAGTAA 651 0.3963 MRFGRCVFLWSQTFIVVQKRHHTKLFANNHTDRNNTYSSENILSGTDVYTKIDHPTEFDFYLCSHAGIQGVHPCDKRRHITEYKKMFPAIDFSLIESDDDILWKPDIREKNEEVAARGLKFLEWLWTHKEKEIDVVTHSGFLFHTLSAFGNDCHPNVKSEICTHFANCELRSVVIIDRGMIGSNESSTNFPDKIPHGLDLPSDVADEKNAANDLTK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1152g00008 216 SUPERFAMILY Ribonuclease H-like 12 71 IPR012337 -
Vivi1152g00008 216 MobiDBLite consensus disorder prediction 186 216 - -
Vivi1152g00008 216 Gene3D - 10 85 IPR036397 GO:0003676
Vivi1152g00008 216 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 55 178 - -
Vivi1152g00008 216 Pfam Piwi domain 13 72 IPR003165 GO:0003676
Vivi1152g00008 216 SUPERFAMILY Phosphoglycerate mutase-like 72 179 IPR029033 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1152g00008 13 70 Eukaryotic Initiation Factors Gene Family AT5G43810 81.034 1.90e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1152g00008 - - vvo:131640134 458.759