Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1149g00018 | ATGGATCTAGCTTCAGCAAAATGTGTAATCAACAGCATTTCTCGATTCATTCATTTAGTTTCGTGCCAAACAGTGAAGCCTATCCCTCTTCAGAAGAACTGTACTAATATGGTTTCCGTTTTGCGGTGTTTGAAACCGGTGCTTGATGATGTTTTTGATTACAAAGTTCCTTTGGATGAGAATTTGTATAGAGAATGTGAAGAGTTGGACAGGCAGGTTAATGAAGCTAGGGAGTTTGTTGAAAATTGGAGTCCGAAGACAAGCAGGGTTCATAGTGTAAGCAGTCAGTTATTATTTGTACCCAAAGTTCTTCAAAGTGGAGAACTGTTAATAATGTTACAGGACACTGCACTTAGGATTTGTCACATAATTGATAGATTCCATAAGTTAACTTCATCTACCTCAGTTTTGAATAATCTTCAGCACCATATGCAGGAACTGAAGTGTCTTAAGAAGGAATCAACATCGGTCTATATAGAAGAAGTGCTGAGAAATCAAAAGGATAATACTAAGCCTAGCTATGAACGTCAAAGGGAAATTATAGAGTTACTTAATTTGACGTCAAACCAGGATCTACTGAAAGAAAGTATTGCTGTGGAAAAGGAAAGGTTGAATGCGGAAGTTAACAAAACAAAAGGGGAGTTGGATAAAATTAACCAAATTGTGAATCTTGTTTGCAGTTTACGTGATTATGCAATGAAAACTAAATGCCCTGAAGTCAAAAGTGATGTGTCAGTCCCAACGTACTTCCGATGCCCTTTATCGCTTGAACTCATGTTGGATCCTGTTATTGTTGCTTCAGGTCAAACATATCAGAGACAGTCCATCCAAACTTGGCTTGATAGCGGGCTGAATGTTTGTCCCAAGACTCATCAGACACTTAACCATGCAATTCTAATTCCCAATTATACGGTTAAAGCTATGATAGCAAGTTGGTGTGAAGAAAATAACATCGAACTTCCCCATCATTCAAAGCAGGGTAATTCTACCCAAAGTTCACCCCCCAAAGATTATTTATTGCATCAAGATTTAAATCGACTCTGTAGTTTTGGGTCTTCGCATAGCAGCAATTCCAATTCAAAATCATCTCTTCAAACCGGAAATGCATTTGAAAAGCAAAAGGGTGATGAGTTCTCCAGATTAAGCGGTGAAGGTGAGACAGAAATGTTTGAGCAACAATCTCAGGCTCATTCATGTAGTCATAGCAGAAGTGAGTCATTTTCAAGTTCTATTTCTAGTACTGATTATGTACCGTCGGTTTCAAAAAAGGTGTCACAGATATCAAATAAGCAATCAAATGTGATGTCGTCTGGAGAAATTAATAATAATGTGTTTCTTGCTTATCCTGCAAATGAAGATGTTGCGAATTTTCCAACGGTATCACAAGAGCAATTTCAAAGCCCTGGATCAAAAGCAACAACGTCAGGGATATCAAATAAACATCAAAATGTGCAGGAGAAGCATCAAAATGTGCAGGAGAAGCATCAAAACGTTCCAACGGTGTCAGGGGTATCGACTAAGCATCAAAGTGTGCTGTTGTCAGGAGAAACAAAGAATAGTGTGTTTCCTGCTTCTCCTGCATATAAAGAATTTGGGAATTTTCCAACGGCATCACAAGAGCAATTTCAAAGCCCTGTATCAAAAAACGCAAAGACGCCAGAGATATCCAATAAACATCAAAATGTGCAGGAGAAGCATCAACATGTTCCAACGGTGTCAGGGGTATCAAACAAGCAACAAAATGTACAGGAGAAGCATCAAAATGTTCCAACGATGTCAGGGGTATCAAATAAGCAAGAAAATGTACAGGAGAAGCATCAAAATGTTCCATTGGTGTCAGGGTTGTCAAATAAACAACAAAATGTACAGGAGAAGCAGGAAAATGCACAGGAGAAGCATCCAAATGTTCCAGTGGTGTCAAGGATATCAAATAAGCATCAAAATGTGCTGGAGAACCATCAAAATATTCCAACAGGGACATCAAATAAGCAACAAAATGTGCTTCTGTCTGGAGAAATTAGTAATAGTGTGTTTCCTGCTTCTCCTGTAAATAAGGAAGTTGAAAATTTTCCAACGGTGTCGCGAGAGCAATTTCAAAGCCCTGGATCAAGAAATGCAATGACGCCGGAGATATCAAATAAACATCAAAATGTGCAGGAGAAGCATCAAAATATTCCAACGGTGGTAGGGATATCAAATAAGCCTCAAAATGTGTCAGGGATATCAAATCAGCATCAAAATGTGCAGGAGAAGCATCAAAATGTTCCAACGGTGTCAGGGATATCAAATACGAATCAAAAAGTGCTTCTGTCTGGAGGAATTAATAATAATGTGTTTCCCGCTTCTCCTGCATATAAAGAATTTGGGAATTTTCCAACGGCATCACGAGAGCAATTTCAGAGCCCTGGATCAAAAAATCATACGACAGAGAATGAAAATAATTACAATAACAATATTGTTTTTACTAGCCATTCAAGTTCAGAAGATGATGTCCATTCTGTTTCCAGCACAGAATCTGATAAATTGACCACCGCACATGTCGGTAAGTTGATTGAAGATCTACAAAGTCAATCAAAAGAAACACAAGCTACTGCTGCCGAAGAATTGCGGCTTCTTACGAAGCATAACATGGAAAACCGTATCATTGTTGGGAAATGTGGTGCCATTATGCATTTACTTCCACTGCTATATTCAGACATGAAGATAACACAAGAGCATGCTGTGACAGCTATACTGAATTTATCGATCAATGAAGACAACAAGACCTTGATTATGGAAGCAGGAGTCATAGAACCACTTATCCATGTTTTGAAGAATGGAAATAATGGTGCCAAGGAAAATTCGGCTGCAACTCTATTCAGCCTCTCAGTACCAGAAAACAATAAGATGAAGATTGGTCGCTCTGGTGCTGTTAAAGCTTTGGTGGAGCTTCTAGCTTCTGGAACTATTAGAGGAAAGAAAGATGCTGCAACTGCTTTATTTAACCTATCAATATTTCACGAGAATAAAGCTCGGATAGTTCAAGCTGGAGCTGTGAAATTTCTGGTTAAGCTATTGGACCCTGCTGATGGAATGGTTGACAAGGCTGTTGCTCTTTTGGCAAACTTATCAACAATCCCAGAGGGTCGAATAGAAATTGTACGTGAAAGGGGAATCCCCTTACTGGTTGAACTTGTGGAATCGGGTTCTCAGAGGGGAAAGGAAAATGCTGCATCGATTGTCTTGCAACTTAGCCTTCATAGCCCTAAGTTTTGCACCCTCATTCTTCAAGAAGGAGCTGTACCTCCCATAGTTGCATTGTCCCAGTTTGGCACGCCAAGAGCAAAGGAAAAGGCACAACAACTTCTCAGTCATTTTCGTAGTCAGCGTGAAGGAGCTAACGGGAGGGGAAAATCATGA | 3399 | 0.3942 | MDLASAKCVINSISRFIHLVSCQTVKPIPLQKNCTNMVSVLRCLKPVLDDVFDYKVPLDENLYRECEELDRQVNEAREFVENWSPKTSRVHSVSSQLLFVPKVLQSGELLIMLQDTALRICHIIDRFHKLTSSTSVLNNLQHHMQELKCLKKESTSVYIEEVLRNQKDNTKPSYERQREIIELLNLTSNQDLLKESIAVEKERLNAEVNKTKGELDKINQIVNLVCSLRDYAMKTKCPEVKSDVSVPTYFRCPLSLELMLDPVIVASGQTYQRQSIQTWLDSGLNVCPKTHQTLNHAILIPNYTVKAMIASWCEENNIELPHHSKQGNSTQSSPPKDYLLHQDLNRLCSFGSSHSSNSNSKSSLQTGNAFEKQKGDEFSRLSGEGETEMFEQQSQAHSCSHSRSESFSSSISSTDYVPSVSKKVSQISNKQSNVMSSGEINNNVFLAYPANEDVANFPTVSQEQFQSPGSKATTSGISNKHQNVQEKHQNVQEKHQNVPTVSGVSTKHQSVLLSGETKNSVFPASPAYKEFGNFPTASQEQFQSPVSKNAKTPEISNKHQNVQEKHQHVPTVSGVSNKQQNVQEKHQNVPTMSGVSNKQENVQEKHQNVPLVSGLSNKQQNVQEKQENAQEKHPNVPVVSRISNKHQNVLENHQNIPTGTSNKQQNVLLSGEISNSVFPASPVNKEVENFPTVSREQFQSPGSRNAMTPEISNKHQNVQEKHQNIPTVVGISNKPQNVSGISNQHQNVQEKHQNVPTVSGISNTNQKVLLSGGINNNVFPASPAYKEFGNFPTASREQFQSPGSKNHTTENENNYNNNIVFTSHSSSEDDVHSVSSTESDKLTTAHVGKLIEDLQSQSKETQATAAEELRLLTKHNMENRIIVGKCGAIMHLLPLLYSDMKITQEHAVTAILNLSINEDNKTLIMEAGVIEPLIHVLKNGNNGAKENSAATLFSLSVPENNKMKIGRSGAVKALVELLASGTIRGKKDAATALFNLSIFHENKARIVQAGAVKFLVKLLDPADGMVDKAVALLANLSTIPEGRIEIVRERGIPLLVELVESGSQRGKENAASIVLQLSLHSPKFCTLILQEGAVPPIVALSQFGTPRAKEKAQQLLSHFRSQREGANGRGKS | 1132 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1149g00018 | 1132 | CDD | RING-Ubox_PUB | 247 | 299 | IPR045210 | - | |
| Vivi1149g00018 | 1132 | MobiDBLite | consensus disorder prediction | 351 | 372 | - | - | |
| Vivi1149g00018 | 1132 | SUPERFAMILY | RING/U-box | 244 | 322 | - | - | |
| Vivi1149g00018 | 1132 | Coils | Coil | 612 | 632 | - | - | |
| Vivi1149g00018 | 1132 | Coils | Coil | 194 | 221 | - | - | |
| Vivi1149g00018 | 1132 | SMART | Ubox_2 | 249 | 312 | IPR003613 | GO:0004842|GO:0016567 | |
| Vivi1149g00018 | 1132 | ProSiteProfiles | U-box domain profile. | 245 | 319 | IPR003613 | GO:0004842|GO:0016567 | |
| Vivi1149g00018 | 1132 | Pfam | Armadillo/beta-catenin-like repeat | 960 | 997 | IPR000225 | GO:0005515 | |
| Vivi1149g00018 | 1132 | Pfam | Armadillo/beta-catenin-like repeat | 917 | 956 | IPR000225 | GO:0005515 | |
| Vivi1149g00018 | 1132 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 245 | 320 | IPR013083 | - |
Showing 1 to 10 of 26 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1149g00018 | - | - | psat:127126040 | 1824.29 |
Showing 1 to 1 of 1 entries