Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1149g00006 ATGGGAAGAGCTCCATGTTGTGAGAAAATGGGGTTGAAGAAAGGACCATGGACTCAAGAAGAAGATAGAATCCTCATCAATCATATAAACACTTTTGGTCATTCCAATTGGCGTGCTCTTCCCAAACAAGCTGGTTTGTTGAGATGCGGAAAGAGTTGCAGATTGAGATGGGCAAATTATTTGAAACCGGATATCAAACGCGGTAACTTTACCAAAGAAGAAGAAGATGCAATAATCAATTTACATGAAATGTTGGGAAACAGATGGTCAGCTATAGCAGCAAGGTTACCTGGTCGAACAGACAACGAGATTAAAAATGTATGGCACACACATTTGAAGAAGAGGCTGCCACAAAACCAACAAGGCAACAATGAAACCTTAAAACAAAGTAAAAAAGAAAGCAAGTTGGAATTCGATGTCGATGCGAAACAAGAACAATGTTCTAGTGACATTCCATCCCATGATAATGATAATAATAGTAATAATAGTATTAGTAGTAGCGTTGTTACTACTAATAATCATGATAATAGTAACAATAATGATGATGTTGATTCGGCGGAAAATAATTTTGCAATGGATGAGGATTTCTGGTCTGAAGTTTTGTCGTCTGATAAATCTAGCATTATGGACATTGGTGGTGATAATTATGAATTTCAAGTTGGTGATGAAGGTGTGTTTAGTTCTAGTTCATTGAGTTTGTGCCAAGATATGGATTTTTGGCATGATGTTTATGCGAGAGCTGAGGAAATAACTGAGCTATTAGAGTTATGA 771 0.3671 MGRAPCCEKMGLKKGPWTQEEDRILINHINTFGHSNWRALPKQAGLLRCGKSCRLRWANYLKPDIKRGNFTKEEEDAIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPQNQQGNNETLKQSKKESKLEFDVDAKQEQCSSDIPSHDNDNNSNNSISSSVVTTNNHDNSNNNDDVDSAENNFAMDEDFWSEVLSSDKSSIMDIGGDNYEFQVGDEGVFSSSSLSLCQDMDFWHDVYARAEEITELLEL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1149g00006 256 CDD SANT 69 112 IPR001005 -
Vivi1149g00006 256 CDD SANT 16 61 IPR001005 -
Vivi1149g00006 256 MobiDBLite consensus disorder prediction 113 127 - -
Vivi1149g00006 256 MobiDBLite consensus disorder prediction 151 186 - -
Vivi1149g00006 256 FunFam MYB-related transcription factor 13 66 - -
Vivi1149g00006 256 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Vivi1149g00006 256 MobiDBLite consensus disorder prediction 113 186 - -
Vivi1149g00006 256 FunFam Transcription factor MYB15 68 142 - -
Vivi1149g00006 256 SMART sant 66 114 IPR001005 -
Vivi1149g00006 256 SMART sant 13 63 IPR001005 -
Vivi1149g00006 256 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 206 - -
Vivi1149g00006 256 Gene3D - 11 67 - -
Vivi1149g00006 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vivi1149g00006 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vivi1149g00006 256 MobiDBLite consensus disorder prediction 128 150 - -
Vivi1149g00006 256 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Vivi1149g00006 256 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vivi1149g00006 256 Gene3D - 68 145 - -
Vivi1149g00006 256 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vivi1149g00006 256 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1149g00006 1 256 MYB Transcription Factor Family AT2G31180 53.788 1.26e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi1149g00006 Myb_DNA-binding 8.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1149g00006 K09422 - gmx:100775603 308.145