Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1146g00010 ATGGAATCTAAACCCGTAAACATTAAGCTTCTCTGTAGCTACGGTGGCAAGATCCTCCCTCGATCAACCGATGGTGAACTCCGTTACGTCGGCGGTCACACCAGAGTTCTTGCCGTTAATCGTTCAATTTCGTTTTCAGAATTGATTGAGAAGCTTCGTGAATTCTGTGGTTCATCTGTGAAATTAAGGTGTCAATTACCAAAAGGAGACTTGGAAACGTTGATCTCCATCACAAACGACGAAGATTTGGCTCAAATAATCGATGAATATGACCGTGCCTCGTTGAAATTAACTCATCCGTTGAAGATCAGAGCTGTTCTTTCTCCGCCGAAATCGGTGTTGAAAGTTTCTCCCGATCCGTCGTCTGCGTCGTCAAGTGCTAGTCGTTCTCCGTACAGATCACCTTATACTTCATCTGAATCGCCACCGTACGCGGCGTCGTATAGAATCGGACGTTACAGTCGCTCGCCGAGGGCGCCGGTAGGGTACTCGTTCGGCGCCAGGAATGGATCGGCGAAAGCCTATTGCTACACGGGCCAAATCGAGAGAGGACCAAGGCCCTTGTATTGTGGGCCTCGTTTCAATAATTACTGCCATTAA 600 0.48 MESKPVNIKLLCSYGGKILPRSTDGELRYVGGHTRVLAVNRSISFSELIEKLREFCGSSVKLRCQLPKGDLETLISITNDEDLAQIIDEYDRASLKLTHPLKIRAVLSPPKSVLKVSPDPSSASSSASRSPYRSPYTSSESPPYAASYRIGRYSRSPRAPVGYSFGARNGSAKAYCYTGQIERGPRPLYCGPRFNNYCH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1146g00010 199 Gene3D - 28 107 - -
Vivi1146g00010 199 CDD PB1_UP2 11 107 - -
Vivi1146g00010 199 SMART PB1_new 22 108 IPR000270 GO:0005515
Vivi1146g00010 199 MobiDBLite consensus disorder prediction 115 143 - -
Vivi1146g00010 199 Pfam PB1 domain 25 97 IPR000270 GO:0005515
Vivi1146g00010 199 PANTHER OS05G0427100 PROTEIN-RELATED 3 126 - -
Vivi1146g00010 199 MobiDBLite consensus disorder prediction 112 143 - -
Vivi1146g00010 199 SUPERFAMILY CAD & PB1 domains 24 113 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1146g00010 3 92 MAP Kinase Kinase Kinase AT5G57610 46.667 2.25e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1146g00010 - - vra:106761207 235.728