Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1146g00003 ATGGAATACACTATTATAGTGGCTGAAACAACAAATTCCCCAGCTACATTACAATACCTCGCGCCTTATACAGGAGCAGCTCTGGCTGAATATTTTATGTATCGTGAACGTCACACTTTAATCATTTATGCTTATCGCCAAATGTTTCTTCTATTACGAAGACCACCAGGTCGTGAAGTTTATCCCGGAGATGTTTTTTATTTACATTCGCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAACTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATCTGCTGATTTATTCAATGCTGGGATCAGACCTGCAATTAATGTGGGTATTTCCGTTTCCAGAGTTGGATCGGCGGCTCAAATAAAAGCCATGAAACAAGTAACTGGTAAATTAAAATTGGAATTGGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCTCTTCAGATCTCGATAAAGCTACGCAAAATCAATAG 555 0.3784 MEYTIIVAETTNSPATLQYLAPYTGAALAEYFMYRERHTLIIYAYRQMFLLLRRPPGREVYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSTYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVTGKLKLELAQFAELEAFAQFSSDLDKATQNQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1146g00003 184 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 147 184 - -
Vivi1146g00003 184 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 139 IPR000194 GO:0005524
Vivi1146g00003 184 Gene3D - 147 184 IPR038376 -
Vivi1146g00003 184 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 184 IPR005294 GO:0015986|GO:0045261|GO:0046933
Vivi1146g00003 184 FunFam ATP synthase subunit alpha, mitochondrial 1 146 - -
Vivi1146g00003 184 Pfam ATP synthase alpha/beta chain, C terminal domain 146 184 IPR000793 GO:0015986
Vivi1146g00003 184 ProSitePatterns ATP synthase alpha and beta subunits signature. 130 139 IPR020003 GO:0005524
Vivi1146g00003 184 Gene3D - 1 146 IPR027417 -
Vivi1146g00003 184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 145 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1146g00003 1 152 Primary Pumps ATPases(2) AT1G76030 29.193 2.35e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1146g00003 K02111 - vvo:131640068 337.421