Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi113g00016 ATGGCTCAAGAGAGCAGCATTGACGTCACTGCAGACTCAGACCCACAGGCTATGGTGGTTACGAAGATGAAGACAAGTTGGATTTTGTTTGATGCTAGGAACCAAGGGTTGATTCTTGACGTGGACAAGCATGCTATCATGCATAGGGTTGAGATTAATGCACATGATCTTAGAATCCTTGATCCCTTTCTCTCTTACCCTTCTACCATTCTTGTTCGAGAGAAAGCTATTCTTCTTAATTTGGAGCATATCAAGGCGATCATCACAGCAAAAGAGGTATTGCTGAGAGATCCAACAGATGAACCTGTGGTCCCTGTTGTTGACAAACTCAAGAGACGATTGCCTACAATAAGTGCCATTCATCACGAGATCGATTCTGCTGAAGAAGATGAGTCACCGTTTGAATTCCGGGCTCTGGAGGTAGCCTTAGAAGCCATTTGTAGTTTTCTTGCTGAACGTACAACTGAGTTGGAGATGGATGCTTATTCTGAATTAGATGAACTTACTTGCAAGATTAGTGGTCTAAATTTGGACAGAGTTCGTAAACTGATTAATGCAATGACAAAGCTGACTGCCGGGGTTCAAAAGATTAGAGATGAGCTCGAAAAATTGCTGCAAGATGATGATAAGATGGCTGACCTATACCTGTCGAGAAAGGCAGGCTCAGCGTCACCAATTAGTGGATCAGATGCTGCCTCCCAAACCATAGAATCCAATATGTCCAGAGCAAGTATGGTAGCAATTAGTTTATATGAAAATGGCGTGGATGAGGTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGATGCTACACTAAACAAACTAATCACGCTACGCGAGTATATTGATGATACCCAAGATTACATCAACATCCAACTCGACAACCATCGAAATCAGCTTATTCGGTTGGAGCTCTTTCTTAGCGCTGGAACTGCTTGTCTAACTTCCTACTCTGTGGTGGCTGGTATTTTTGGCATGAACATCCCATATACTTGGAATGATGACCATTCATACATGTTCAAATGGGTAATTATTTTTGGAGGCATATTCTCTGCTTTTTTGTTTCTCATGATTACCCTCTTTGGTCTCAAAAAGGGGTTGCTTAAAACATGA 1116 0.4167 MAQESSIDVTADSDPQAMVVTKMKTSWILFDARNQGLILDVDKHAIMHRVEINAHDLRILDPFLSYPSTILVREKAILLNLEHIKAIITAKEVLLRDPTDEPVVPVVDKLKRRLPTISAIHHEIDSAEEDESPFEFRALEVALEAICSFLAERTTELEMDAYSELDELTCKISGLNLDRVRKLINAMTKLTAGVQKIRDELEKLLQDDDKMADLYLSRKAGSASPISGSDAASQTIESNMSRASMVAISLYENGVDEVEMLLEAYFMQIDATLNKLITLREYIDDTQDYINIQLDNHRNQLIRLELFLSAGTACLTSYSVVAGIFGMNIPYTWNDDHSYMFKWVIIFGGIFSAFLFLMITLFGLKKGLLKT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi113g00016 371 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 24 363 IPR039204 -
Vivi113g00016 371 Pfam CorA-like Mg2+ transporter protein 249 359 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi113g00016 371 Gene3D - 14 98 - -
Vivi113g00016 371 Gene3D Magnesium transport protein CorA, transmembrane region 107 301 - -
Vivi113g00016 371 Coils Coil 187 207 - -
Vivi113g00016 371 CDD Mrs2_Mfm1p-like 27 362 IPR039204 -
Vivi113g00016 371 FunFam Magnesium transporter MRS2-1 16 98 - -
Vivi113g00016 371 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 307 358 IPR045863 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi113g00016 13 344 MRS2 Gene Family AT5G64560 65.738 2.40e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi113g00016 K16075 - gmx:100786817 486.878