Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi113g00013 ATGGATGATGATGCTATCGTGGAATATGAGAAGTTCTCGTCACACCTCACGTGTGTTTTGTGTAATCATCTTTTCAAAAATGCCACCACAATTTCTGGATGCTTCGATACTTTTTGCAGGGAATGTATAGAAAGGAAGATAGTAGATGAGTATCTAACACATTGTCCAATATGCAATCTAGACTTGGGATGTTCTCCTTTAGACAAACTAAGGACGGATAATAATAAGATAACAATGATTAGTAAAATTATGACCTCTACAAAGAAACACTTTGGAAAAGGTGAAAGTGTTGCTTCAACTCAAGTAGTTACAAAGAAAAGGAAGAACTCTCGAGCCTCTTTGCAATCCAAAGCGAAAAAGGCGAGAAGAGATTCAAAGAAAATTAAGAAAGAGATAAGAAAAGGAAAGCGGGTTCAACGAGAGCCAAAGCAGTTGCTAGAAGAACTTCCTATCACTCCACAGGAACCAAAAACTACTGCTGCTGAAATCGCTGTTGCAGCAGATGTTAAGAAAGACGCGACACAGCAGCGCGGAATAGAAATTCTGGATGAAGTTTCTACAATTCTGTCTGCCAGAAAAGCTAAAAATGTGGCGAGGAAAAAGTTTATCAGAACTGAATTAGATTCTACTTCTCAGCCTGACAAAGTCATTTCTGATGGAAAGAAAGACGATATCCTCCCTCGGCTTGAAGCATTCACCGAGACTCCAAAAATCAGATTTAAGAGTTCTTCAAAACCAGAATCATCGAACCAGAAATCAGTGTTCAAGAATGTTTCAATGGACAAAGCTGAGTTAAGGAAAGAAAAAGCTGCTGCTGTTAGCGAGCCGTTGAATTGGTTTGTGGAAACTGCAAACGCGGACAAGTCTGTTAATAACTCCGCTATGCAAGGAAATGGTGTCATCCCAATGCTTGTGGACTCTAGTGACAGCGACTCTCGTAACGTTTCTAAGGCTGATGTTAACAAGCATTATAACCCCCAAACAGAAGCAGGTGGTGATCAAAACGAGTCTGGTCCATCAAAATCAAGTTCCTTGAAGTTTAAGATTAAGAGGGTGGACACAAACCAAGAAAAAAGAGTGAGGTTTTCAGAGGACTTGAACCTTCCAGCACCACCTGAAAGTGAAAGCAAAAAAGAGTTTGAAAGCAAAAAAGAGTTCGAAAGCAAAAACGAGTCGGGCCCTTTTTGGTTCTCCTTGATCGCGTCTAAGGATCGGGAACTCGGTGTGCTGCCACAAATATCTTCTCATTACTTAAAAGTCAAGGATGGGAGTTTAACTGTTTCATACATAAAAAAGTATCTTGTGAAGAAGCTTGATCTTGCTAGTGAAGCTGAGGTGGAGATTTTGCTAGGAGGGAAGCCAGTTTATTGTTCAATGCAGCTGCAAAACTTGATGGAGATGTGGTTGGAAACAATGTCAAAGAAAGAAATGATTGAGACATCTGTTGGAAGTTCTGCTGAGGATTTTGTTATGGTCCTTTCTTATGGTAGAAAGGCTTGA 1500 0.4013 MDDDAIVEYEKFSSHLTCVLCNHLFKNATTISGCFDTFCRECIERKIVDEYLTHCPICNLDLGCSPLDKLRTDNNKITMISKIMTSTKKHFGKGESVASTQVVTKKRKNSRASLQSKAKKARRDSKKIKKEIRKGKRVQREPKQLLEELPITPQEPKTTAAEIAVAADVKKDATQQRGIEILDEVSTILSARKAKNVARKKFIRTELDSTSQPDKVISDGKKDDILPRLEAFTETPKIRFKSSSKPESSNQKSVFKNVSMDKAELRKEKAAAVSEPLNWFVETANADKSVNNSAMQGNGVIPMLVDSSDSDSRNVSKADVNKHYNPQTEAGGDQNESGPSKSSSLKFKIKRVDTNQEKRVRFSEDLNLPAPPESESKKEFESKKEFESKNESGPFWFSLIASKDRELGVLPQISSHYLKVKDGSLTVSYIKKYLVKKLDLASEAEVEILLGGKPVYCSMQLQNLMEMWLETMSKKEMIETSVGSSAEDFVMVLSYGRKA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi113g00013 499 MobiDBLite consensus disorder prediction 110 134 - -
Vivi113g00013 499 Coils Coil 111 131 - -
Vivi113g00013 499 MobiDBLite consensus disorder prediction 319 344 - -
Vivi113g00013 499 MobiDBLite consensus disorder prediction 371 385 - -
Vivi113g00013 499 MobiDBLite consensus disorder prediction 301 385 - -
Vivi113g00013 499 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 153 498 IPR044807 GO:0004842
Vivi113g00013 499 SUPERFAMILY RING/U-box 10 73 - -
Vivi113g00013 499 ProSiteProfiles Zinc finger RING-type profile. 18 59 IPR001841 -
Vivi113g00013 499 MobiDBLite consensus disorder prediction 346 364 - -
Vivi113g00013 499 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 141 IPR013083 -
Vivi113g00013 499 MobiDBLite consensus disorder prediction 106 137 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi113g00013 1 114 C3H Transcription Factor Family AT2G30580 37.931 2.46e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi113g00013 K16277 - pop:7474161 231.491