Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi113g00011 ATGTTTAACACCAACTACTCCAGCGTCGGCATAAGTGAGATAAAGGAGGAAGAAGACACCATCAACCACCACCAGTACCTAGACACAATCCACAATGAAATTGAAGAACAAAAACAAGACTCTATTTATGTTGCAGTTGGTAAGAGCGATACAAGCATGGAAGCTCTCTCATGGACACTCAATAACCTAACCACTCATTCCACCATGCTCTATCTCATTCATGTATTCCCCCAAATCAAACACATTCCACATCCATTGGGGGTAGGAATGATTGCTAAGAATCAAATTAGTGTTGAACAGGTAGAGATTTATATGGAACAAGGAAGAAACAAGAGGAGACAATTCCTACACAAGTTTATCCAATCTTGCTTTCTTTCCAAAGTTAAGGTTGATACTATCTTACTAGGGAGTGATTTCGTTGCAAAAGCCATTCTTGACCTAATTCCAATTCTTCAAATATCAAATTTAGTCATTGCAATCCATTTGAAATTCCTTTGCAAAGCAGGAAGCATAGACTCCGTTGGTGCTAAATGCTGCCTTTTTACGGTTACATAG 555 0.3874 MFNTNYSSVGISEIKEEEDTINHHQYLDTIHNEIEEQKQDSIYVAVGKSDTSMEALSWTLNNLTTHSTMLYLIHVFPQIKHIPHPLGVGMIAKNQISVEQVEIYMEQGRNKRRQFLHKFIQSCFLSKVKVDTILLGSDFVAKAILDLIPILQISNLVIAIHLKFLCKAGSIDSVGAKCCLFTVT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi113g00011 184 Gene3D HUPs 24 179 IPR014729 -
Vivi113g00011 184 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 5 162 - -
Vivi113g00011 184 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 40 161 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi113g00011 39 159 Plant U-box Gene Family AT5G57035 30.645 1.77e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi113g00011 - - lja:Lj4g3v0097300.1 185.267