Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1139g00006 ATGGGAAGTGTAGAGAGAGAGATGAAAAATATGAGAGAATATTTTAGGAGTGGAGTAACAAAGGAAGCATCTTGGAGAGAATCACAACTAAAAGGGTTGCGTCGTTTTCTTATGGAAAAAGAGAGTGATATCTTCAAAGCTCTCATGCAAGATTTAGGGAAACATAGAGTTGAAGCTTTTAGAGACGAGATAGGAACGTTGGTGAAGACTTTAAATCTAGCAATAAAGTGTCTGAAGGATTGGATGTCAAGCAAGAATGCTAGCCTACCAGCATTAGCATTGCTAACAAGTGCAGAAATTGTTCATGAGCCTCTTGGTCTTGTCCTCATTATTTCTTCTTGGAATTTCCCATTTGGATTGTCTTTGGAGCCATTGATAGGAGCAATAGCAGCTGGAAACACAGCAGTGTTGAAACCTTCAGAGTTGTCTGCATCATGTTCCTCTTTACTTGCTTCTGGTATTGCTACTTACTTAGATAATAAAGCCATTAAAGTTATTGAAGGGGGACCACAGGAATCCCAGCTGTTATTGCAACAAAAATGGGACAAAATCTTCTTTACAGGTAGTGCACGCGTGGGGCGCATTGTGATGTCTGCTGCTGCGACGCACCTGACCCCTGTAACGCTCGAGTTGGGCGGAAAATGTCCAGCAGTCGTGGACTCACTTTCATCTTCTTGGGACTTAGAGGTTACTGTGAAGAGGATTATTGTGGGAAAATATGGGACTTGTGCTGGTCAAGCATGCATAGCAATTGATTATGTTATTGTGGAAAAGAGTTATTGTTCAAAACTGGTGGAATTGATGAAGGTGTGGATCAAGAAAATGTTTGGAGATAACCCAAAACATTCAAATACTATAGCAAGGATAGTTAATAAACAACAGTTAGTTAGATTGAAGAAACTTCTTATTGATCCCAAAGTTAAAGAATCTGTGGTTTATGGTGGCTCAGTGGATGAAGAGAATTTATTTATTGAGCCAACAATCTTGGTGGATCCACCACTTGATGCAGCAATAATGGTAGATGAAGTTTTTGGCCCATTACTTCCAATTATCACTGTGGAGAAAATTGAAGACAGTATTGAATTCATAAGCTCTAGGCCTAAACCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTACAGAACAGAATGATATCAGAAACATCGTCTGGCAGTGTTACTTTCAATGATGCAATTCTTCAATATGCAGCAGATAGTTTACCATTTGGAGGAGTAGGTGCGAGTGGATTCGGCATGTACCATGGAAAATTCTCCTTTGATACATTCAGTCACCAGAAAGCTATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGGTATCCACCTTGGACAGCAAACAAGTTTCAACTGCTTGAAGTTTCTTACAATTATGATTATCTTGGATTGGTCCTTGTTATTCTTGGGTTAAAGAGACCGTCGAAACGCCAAATCGTGCCTTGTTAA 1470 0.3939 MGSVEREMKNMREYFRSGVTKEASWRESQLKGLRRFLMEKESDIFKALMQDLGKHRVEAFRDEIGTLVKTLNLAIKCLKDWMSSKNASLPALALLTSAEIVHEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNTAVLKPSELSASCSSLLASGIATYLDNKAIKVIEGGPQESQLLLQQKWDKIFFTGSARVGRIVMSAAATHLTPVTLELGGKCPAVVDSLSSSWDLEVTVKRIIVGKYGTCAGQACIAIDYVIVEKSYCSKLVELMKVWIKKMFGDNPKHSNTIARIVNKQQLVRLKKLLIDPKVKESVVYGGSVDEENLFIEPTILVDPPLDAAIMVDEVFGPLLPIITVEKIEDSIEFISSRPKPLALYVFTKNQTLQNRMISETSSGSVTFNDAILQYAADSLPFGGVGASGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTANKFQLLEVSYNYDYLGLVLVILGLKRPSKRQIVPC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1139g00006 489 Pfam Aldehyde dehydrogenase family 4 436 IPR015590 GO:0016491
Vivi1139g00006 489 PANTHER ALDEHYDE DEHYDROGENASE 3 476 IPR012394 GO:0006081
Vivi1139g00006 489 FunFam Aldehyde dehydrogenase 12 216 - -
Vivi1139g00006 489 PIRSF ALDH 2 473 IPR012394 GO:0006081
Vivi1139g00006 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Vivi1139g00006 489 FunFam Aldehyde dehydrogenase 213 416 - -
Vivi1139g00006 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Vivi1139g00006 489 SUPERFAMILY ALDH-like 4 453 IPR016161 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1139g00006 3 480 Aldehyde Dehydrogenase Gene Family AT4G36250 54.812 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1139g00006 K00128 - gmx:100817701 791.186