Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1138g00001 ATGTCTTCTCACGATTCAGTAAGCACGGTGTTCAAATGTATGCAAAACGGAGCCGTTGATTTTCTCATTAAACCTGTTCGCAGGAATGAGCTAAGGAACTTGTGGCAGCATGTGTGGAGAAGACATACTATTAGCAAGCCTCCTCAAAATATAACATTGGCACATGATAAACTTGATGTTGCTGAAGAAAACAATACTGCAAGTAATAATTCTAGTGGTTCTGTAGCTTCCACGCAGAAAATCGAGTGCAGTGGAAAAAATAGTGAGACTCCAGCTCAAGATATGTCCCAGCTGAAGAGTTCTTCGAGTTTGAGCAATACAGACCAGGTGAAGCACGAAAATTCTACCAAATATGAATGGGAGTCTACCGAGTATAATGACGAAACAGGAGAGAAATCAGCTTTAACAGCACCTAAAGCTGCAGGGTGTGGCAAAATTTCAACAGGTTTAAGGCTAGGTCAAAGCTATGAATATAATGAAACAGAAAACCAAGATGAAGAAGGGTTAAGAACAGAGTTAGGCAAAGCCAATCCTCATGTTAATACAAAAATTCATCGACGCAATGATGAACTAGAAGAACATTCTGCTGGGGCTATTGACTTGATGGCTACTTTTGAGAATCTTCCAAAAAGCAGTTATGCAGATTGTAATTTCAACGGTGGTAACACAGCCAAGTTAGAATATGATACACAATTGGAACTTTCATTACAAAGAGATTATCCTGGCAGCTCATCTAAACCTACCACTGAGGAAAGGCAAAAATTGAATCATTCAAATGATTCTCCATTTTCTCGGTGA 798 0.3935 MSSHDSVSTVFKCMQNGAVDFLIKPVRRNELRNLWQHVWRRHTISKPPQNITLAHDKLDVAEENNTASNNSSGSVASTQKIECSGKNSETPAQDMSQLKSSSSLSNTDQVKHENSTKYEWESTEYNDETGEKSALTAPKAAGCGKISTGLRLGQSYEYNETENQDEEGLRTELGKANPHVNTKIHRRNDELEEHSAGAIDLMATFENLPKSSYADCNFNGGNTAKLEYDTQLELSLQRDYPGSSSKPTTEERQKLNHSNDSPFSR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1138g00001 265 MobiDBLite consensus disorder prediction 234 265 - -
Vivi1138g00001 265 MobiDBLite consensus disorder prediction 234 249 - -
Vivi1138g00001 265 MobiDBLite consensus disorder prediction 64 136 - -
Vivi1138g00001 265 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 172 IPR045279 GO:0009736
Vivi1138g00001 265 Gene3D - 1 141 - -
Vivi1138g00001 265 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Vivi1138g00001 265 MobiDBLite consensus disorder prediction 112 128 - -
Vivi1138g00001 265 MobiDBLite consensus disorder prediction 64 111 - -
Vivi1138g00001 265 MobiDBLite consensus disorder prediction 159 180 - -
Vivi1138g00001 265 SUPERFAMILY CheY-like 1 48 IPR011006 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1138g00001 1 106 Response Regulator Gene Family AT5G24470 42.017 1.01e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1138g00001 K12130 - vvo:131640011 519.235