Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1133g00002 ATGGAGATGATTAAGCTTATAGTTTTACCAACAATTTTGGCACTTTTTGTCCTCTTTTTGCATTTCATCACAAGAATTATCAAACTCAGAAAGCTGAATCTTCCTAAGGGGACATTAGGATTACCTATTATTGGAGAAACCTTAGAGTTTTTCAAAGCAAATCTTGAGGGGAAACAAATAAGGTTCATACAAGAGAGAATGAAGAAATATGACTCTAGGGTTTTCAAGACATCAATGTTTGGAGAGAATACTGCTATGTTTTGTGGAACAGCTGGAAACAAATACTTATTTAGCAATGAAAACAAGAATGTTCAAGTGTGGTGGCCTAGTTCAGTTAGGAAGCTGTTAAGGTTGTCTCTTGTTAATAAAGTTGGTGATGAAGCAAAGATAACTAGAAGGTTGCTTATGAATTTTCTAAATCAAGAGACTCTCAGAAATTACCTGCCAAAAATGGACAGGATTGTTCAGCATCATATCAACACACATTGGAAAGGGAAGGAGCAGGTTATTGTATATCCAATAATACAACTATACACATTTGAATTGGTTTGTTGCTTATTTTTAAGCATGGAAGATCCTATCCAACTATCATACCTTTCATCATATTTTGAAGAATTTCTCAAAGGGGTCATTAGCTTCTCCATTAATTTTCCTGGAACAGGGTTTCATAAGGCAATGAAAGCTGCAGATGAAATAAAGAAAGAAATTAAATTGATTATGAAGAAAAGGAAAGTGGATTTGGAAGAAAAGAAAGCTTCACCTACACAAGACCTTCTATCACATTTACTTGTTACACCTGACACAAGTGGAAGGTTTATGAGTGAAGTGGAGATTCTTGATAACATGTTACTACTTCTTTTTGCCGGCCATGACACTTCCAGATCTGTAATCTCATTGATCATGAAGTATCTTGGAAATTTGCCCGAAGTTTATGAACAAGCGTCGAAAGAACAACTTGATATTAGCCAAGGGAAAGAGTCAGGCGAGTTATTGCAATGGGAGGATATTCAGAAAATGAAACACTCTTGGAATGTTGCATCTGAAGTTTTAAGGTTGTCGCCGCCGACTGACGGTGCTTATAGAAATGCTATGAAGGATTTGACCTATGCTGATTATAACATCCCTATTGATTGGAAGTTCCATTGGAACACTCATACAACACACATGGATCCAACACTACTTACAAATCCTGAAATATTTGATGCATCAAGATTTGAAGGAGAAGGCCCAGTACCTTACTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGACAAGAGTTTGCTCGGCTAGACGTACTTGTGTTTATGCATAATATTGTGAAACATTTCAAGTGGGATTTAATTAATCCTGATGAGAATTTCAAGTATGATCCAATGCTACAACCCGAAAAAGGACTTCCAATTCATCTCCGTCCTTCCCATTACACATCATAA 1443 0.3652 MEMIKLIVLPTILALFVLFLHFITRIIKLRKLNLPKGTLGLPIIGETLEFFKANLEGKQIRFIQERMKKYDSRVFKTSMFGENTAMFCGTAGNKYLFSNENKNVQVWWPSSVRKLLRLSLVNKVGDEAKITRRLLMNFLNQETLRNYLPKMDRIVQHHINTHWKGKEQVIVYPIIQLYTFELVCCLFLSMEDPIQLSYLSSYFEEFLKGVISFSINFPGTGFHKAMKAADEIKKEIKLIMKKRKVDLEEKKASPTQDLLSHLLVTPDTSGRFMSEVEILDNMLLLLFAGHDTSRSVISLIMKYLGNLPEVYEQASKEQLDISQGKESGELLQWEDIQKMKHSWNVASEVLRLSPPTDGAYRNAMKDLTYADYNIPIDWKFHWNTHTTHMDPTLLTNPEIFDASRFEGEGPVPYSYVPFGGGPRMCLGQEFARLDVLVFMHNIVKHFKWDLINPDENFKYDPMLQPEKGLPIHLRPSHYTS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1133g00002 480 Gene3D Cytochrome P450 23 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 Pfam Cytochrome P450 35 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 SUPERFAMILY Cytochrome P450 28 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1133g00002 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Vivi1133g00002 480 FunFam Taxadiene 5-alpha hydroxylase 26 476 - -
Vivi1133g00002 480 CDD CYP90-like 66 475 - -
Vivi1133g00002 480 PANTHER CYTOCHROME P450 26 31 461 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1133g00002 33 379 Cytochrome P450 AT5G36110 40.571 6.82e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1133g00002 - - gmx:100778750 736.873