Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1132g00004 ATGGAAAGTTGCTTAGCTGATTTGGGAAAGGGCTATGCGGAGAAATTGATAAATGGGACATTAGCAGAATTACGTCATGTATTTTGCTTCACATGCACTGCTAAGGAATTCAAAGAAAAAAAGATTTGGCTGGAAGCAAAAATAAAAACAATGGAGCAACATGCTAAAGTGGCAGCAGGAAATAATAAAGATATTGAAGCTGATTATCATTTATGGAAAGAGAAAGCTGAAAAGCTCGTTCAAGAGGACATCCAAACAAAACAAAAATGCTTTTTTGGATTATGTCATGATTGCATATGGAGATATAAAAAGGGAAAGGAGCTGGCAAATAACATAGAAGAGATTAAGCAATTAACAGAAAAGGGAGGGACATTTGAAAATATTGAAATCTCTCGCCGTCTTCCGGATGTTGAACGCTACTCATCTAAAGAATACATTTCTTTTCCAAGTAGAGATTCAAAATACAAAGAGATTTTGGATGCAATAAAAGATGACAACAACTATATGATCGTATTGCAAGGGATGGGGGGCACCGGAAAAACTACATTGGCCAAAGAAGTGGGTAAAGAGCTAAAGTCTGAACAATTTGCTCATGTAATCGATACAACAGTCTCATTTACTCCTGATACAAAAAAAATTCAAGATGATATTGCTGGATCTTTAGGATTGAAATGGGAGGATTGTACTTACTCAGACCGAGCCAAAAAACTATGGAGCAGATTAACAACTGATGAAAAAGTTCTTATAATAATGGATGATGTGTGGGAAGGAGGCCCACCTCTTGATTTCGAGCTAATAGGAATTCCAAAACAGGACAATCACAAAGGTTGCAAAGTTCTTATAACCACACGCAGTAAACGAATATCCAATATTATGGGGTGTGATAAGATGATTGAATTAGATCTCTTACCTGAAGAAGAAGCATGGACCATGTTCAAAATGTATGCCGGTATAACCAATAATTCTTCAAAAAGTTTGATCGCCAAGGGACGTGGAATTGCTAAGGAGTGCAAACAATTGCCGGTTGCAATTGCAGTTATTGCCAAAAGTTTAAAAGGCCAACAAGATCGTAAGCACAAATGGGATACTACCTTAAAATTATTGAAGGAAATCGTTTCCATGGACGATGTTGATGAAGAAAAGGTTGGAATTTACAAATGTTTGAAGCTTAGCTATGATCTTATTAAGTATGAAAAATCCAAGAGATTATTTCTCTTAGCTTCTTTATTCCCAGAAGATAAAGAAATTCCTATTGAAATTCTAACTAGAATTGGCATTGGAACGGGCATTTTTGGAAAAAATTATGGAAGCTACAATGATGCTAGAAACCAAGTAGGTGTAGCTAAAGATAAACTCATAGATTCATGTTTGCTGGTGGGGGTCGATGAAAAACATGTAAAAATGCATGATTTGGTTCGTGAAGCGGCTCAATGGATAGGATACAAAGAGATTCGACATGTAAATTTGTCAAACATAGCTGAAAGATCGTCAGTTGAAAAGGAAAAAAATATGAAACATTTATTTTGTAAAGGGAAGGATATGGATTTGTTTTCCTGGAAGTATGATGGTTCCAAACTTGAGACTCTAATTCTCGATGTGGAAATGTATGAAGGCGATAAATGTATGGAAGCCCCAAATTCTTTCTTTGATAATGTTGACCAACTTCAAGTTTTGTACTTTTTAGGTCATGACAAACAACCCTTATCATTGCCACATTCAATTCACTCAATGTCAAAGATTCGATCGATACTGGTTGATGGAGTTGATTTAGGTGACATCTCTGTTTTGGGAAATCTGCAAAGTCTTGAGACTCTTGATTTTGTTGGTTGCATAATCAATGAATTACCAGACGAAATTGCAAAGTTGGGGAAATTTAAATTGTTAAACTTGGAATATTGTCAAATTAGAAGGAATGATCCATTTGAGGTTATTAAAAGATGCTCAACACTTGAAGAGTTGTACTTTATTGATAGTTTTAATGAATTTTGTCAAGAAATTACCTTACCCGAATTGCAAAGGTATCATATCCGGAACGGGTGGTGGACAATGCTTCCTGATTCACTATCAAAATATGTGTCTTTTAAAAAAATTGATGGCAACAAATATTTTTTTTCAAAACAAACATTCAAGTATCTCATGCAAACAACAGAGGTTCTTCAACTAGAGGAAATTAAGATGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTATAGATCAAGATATGAAAGATCTTATAGAGCTACGTCTTAGACGTATTTCAAAATTACAGTGCCTCATCGACACTAATGGTTCTCAATTTCTTAATGTATTGTCCAACTTGGTTATGTTAGAACTGGATGAAATGGAAAATTTGGAAGTACTATTCCATGGTTCTCTTTCTTTTGACTACTCTTTAAAGAATTTGGAGAAGGTATCAATAAAAAAGTGTAAAAAGCTTCGAATATTGTTCAATTGCAACCTAAATCTCTGCAATCTAAAGAGTTTGTCACTGTCAGATTGCCCATTGTTGGTTAACCTCTTTCCACTGTTAACTTCTCAGAGCCTGGTGCTGCTAGAGGAATTCAAGATAGCAGATTGTAAGGGATTGAAGAACATAGTAATAGATGATGGTGATAATAATGACAAGAGTCATGGCCCAATGTATCCAAAACTAAGATTTCTTTCTATTGTAAGATGTGATCAATTAGAATCAATATTTCCTTTCCTCTCTTTTGAAGACTTTTCAGTACTAGAAGTTATCAACATAACAAAATGTGATAAGCTACAATATATATTTGGCCAATATCAACATGTTGAACTCAAGTCATTGAAAGAGATAAAGCTTGGTGAATTACCAAATTTCATGGGAATCTTTCGAGAATATTCGCATTCCATGTCTTCGCTCGTGAAAGAGTTATCTTCCACTTCTAGAGATGGTTCCAAAGCACAAACAGAAGTGGATCCTATCAAATGCAACATCTTATCTTTGAATTGTTTATGTTGTCATGGTAATAACTATAGAAAGAAATCTGGGAGTATCTCAACTCCTAAAGTACCATTGGTTAATGAAGATCCAATGCAGAACAATTCATCAACATCAATATTAAGTTCACACCATCTTCATATATTGGAACATGCACAATGTTTTCCAGTACAACCGCATATCATGTCCAATATAAAAGAGCTTAAGCTATATGGGTTTTTGAAGATAAATTATGTGTTTATTCTTTCTATTACTCCAAGAATGTTGGTGGAAACTTTGACAGTTGAGAATTGTGATGAATTAAGGCACATAATAGTAGACATCGGAGATGATGATAGAGTTGGCAAAAGTTTAAGCAATGTGTTTCCAAAATTGAAAAAGCTTTACGTCAAAGATTGCATGCAATTGGAATACATATTTGGACACTACACTGATGACCATCTACCAGAATTGGAAGGTCTGACACTTAGCCATCTGCCAAAGTTTGTTGCCATGTGTCCCCAACAATATTGCCTGACATTTCCACCTTTGAAACAACTTGAACTCTCAGAATGGCCCTTGGTTGCTATCAAATCTATTGGCGAATTCATTATTAATCTTTCAGATTCAAAATCTCTTGACAATACAAACATGAAGGAATTGAGTGGGAGCATAGAACATTCTTTTGCCCTACAAAACCTTACAGAGATAAAAATCAAGGGATGTCAAAAATTGGAAATAGTTTTCTCCAATTCCATTTCAACATGCCTACCACAATTGTGTGATCTAAGAATAGAAAATTGCAAAGAATTGAAGCATATCATTGAAGATGACGACACGTCAAATTCTTTGTCTCCAAGGATATTCTTTCCAAAGTTAAAAACACTTATTGTAATAAAGTGTCGCAAATTGAAATGTGTCTTCCCGGTCTCCATATGCAAACAATTTTCTAAGTTAGAGGCTTTGATGATAATTGAAGCAATTGAACTTGAAGAAATATTCAAAAGCAATGGTGATCAGAAAGTCGAGATCCCAAATCTAAAAGTTGTAGTATTTGCCCACCTACCAAGCCTCTTCGAAGCCCAAGGAATTCATTTTCAGTTGGTAAAAGGTCGTTTACTACGAAATTGTCAAAAACTCAGGCCTTTGACTTCAACCTTTGTTAATTATTTCCCAATTGGGAATTTTAAATATTTCCCAGGTTTTAAGATTGCAGTTGAAGCAATATTACTATACGAGTGGACTTCTCGGAGTCTATACTCTTCACAGGAACAAAATGTTGATGTTAGAAAATTTCTACAAATTACCGAGGTTAATGATCATCAAGAAACTACAAAAGACATTGTTGTTGGTGTTGCGTCTGAAATTGAAGCAGCGTTAGGACACACGTTAACTTCTTCACAGATAATAATGAAACAAACACCAGAGGTAGAGCATGAATTACAGATACCATCAGTAACAGTATTACCAACAAGTTCAAAAGAGTTGAAAAAAGAACAACCGCCAAGTCAACAACGTTTGACAAATCAACAAAATCCACTTGGAGAAATCGATACTTCCATCAAACCTTCTCAGGATGTTGAAGAAGGAACTCCATTAACAAATGCCAAGACAATAACAGCCTCAACTCATTCTGAATTAATCAGATCATCACAAGTGAAGGAACAAGACGTTGATGTTAGAGACACTTTAGAAACTACTTTGATTAATGATGAACGAGTTTCTCTAAATGAAGATGTTGTCATGAAAGAAAGCCCAATTATTGAAGAACAGTTTTCTAAGGGTGATGGATTTACTATTTTGAAATCTAAGCCCTCTCCTAGCAATAATGTTCCCATGCCTCTTGCATTTCAGGCTCCTTCAATGCATATCGAAGGGAACCCTTCTCAAAATGTGGAAGATTTAAGTTCTCCTTATCTTGTCACGCGGAAGCTTGAGGAATTGGTTTCCCAAAAGCATTTGGATTATGAGAACTTGTCTTTGTTGACTGATTTTTTTGTTAAGCATCCTTCAGTTCTTCTAAGTGACAAACATAGTAATGGATATAAGGGCCATGCATACAAGTTCCTAACTAACCTATTGAAATTCCTCCAAACCCACAGTGTGTTGGATGTGCTAGGTTCTTGCAACTCTGAATTTGTTGAGTTAGTACATGACGTGCGCAGTTTTTCTTTTGACAAAGATTGGTTGGATGGAGTTGAAAAGCGCGCTTTGTTTCCTGATATGGAATTCTCTCAAGATGCATTGCAAAAATTATTAGATTCCAAGAAACAGATTACCGAGGATGTTGAAGTAATGCGTTTCAAGATTGACATTTTAACTCGAGATGTGGAAGAACTTAAGCAACAATTGTCCTCCTCTGAAGCTGGTTTAGAGAGTGTCATTCAACGAGAGAAAGAAATTGTAGAATCTAAAGCTTCTTTGAGTGTCCCTCTTGGCTATTAG 5388 0.355 MESCLADLGKGYAEKLINGTLAELRHVFCFTCTAKEFKEKKIWLEAKIKTMEQHAKVAAGNNKDIEADYHLWKEKAEKLVQEDIQTKQKCFFGLCHDCIWRYKKGKELANNIEEIKQLTEKGGTFENIEISRRLPDVERYSSKEYISFPSRDSKYKEILDAIKDDNNYMIVLQGMGGTGKTTLAKEVGKELKSEQFAHVIDTTVSFTPDTKKIQDDIAGSLGLKWEDCTYSDRAKKLWSRLTTDEKVLIIMDDVWEGGPPLDFELIGIPKQDNHKGCKVLITTRSKRISNIMGCDKMIELDLLPEEEAWTMFKMYAGITNNSSKSLIAKGRGIAKECKQLPVAIAVIAKSLKGQQDRKHKWDTTLKLLKEIVSMDDVDEEKVGIYKCLKLSYDLIKYEKSKRLFLLASLFPEDKEIPIEILTRIGIGTGIFGKNYGSYNDARNQVGVAKDKLIDSCLLVGVDEKHVKMHDLVREAAQWIGYKEIRHVNLSNIAERSSVEKEKNMKHLFCKGKDMDLFSWKYDGSKLETLILDVEMYEGDKCMEAPNSFFDNVDQLQVLYFLGHDKQPLSLPHSIHSMSKIRSILVDGVDLGDISVLGNLQSLETLDFVGCIINELPDEIAKLGKFKLLNLEYCQIRRNDPFEVIKRCSTLEELYFIDSFNEFCQEITLPELQRYHIRNGWWTMLPDSLSKYVSFKKIDGNKYFFSKQTFKYLMQTTEVLQLEEIKMGWRNLMPEIVPIDQDMKDLIELRLRRISKLQCLIDTNGSQFLNVLSNLVMLELDEMENLEVLFHGSLSFDYSLKNLEKVSIKKCKKLRILFNCNLNLCNLKSLSLSDCPLLVNLFPLLTSQSLVLLEEFKIADCKGLKNIVIDDGDNNDKSHGPMYPKLRFLSIVRCDQLESIFPFLSFEDFSVLEVINITKCDKLQYIFGQYQHVELKSLKEIKLGELPNFMGIFREYSHSMSSLVKELSSTSRDGSKAQTEVDPIKCNILSLNCLCCHGNNYRKKSGSISTPKVPLVNEDPMQNNSSTSILSSHHLHILEHAQCFPVQPHIMSNIKELKLYGFLKINYVFILSITPRMLVETLTVENCDELRHIIVDIGDDDRVGKSLSNVFPKLKKLYVKDCMQLEYIFGHYTDDHLPELEGLTLSHLPKFVAMCPQQYCLTFPPLKQLELSEWPLVAIKSIGEFIINLSDSKSLDNTNMKELSGSIEHSFALQNLTEIKIKGCQKLEIVFSNSISTCLPQLCDLRIENCKELKHIIEDDDTSNSLSPRIFFPKLKTLIVIKCRKLKCVFPVSICKQFSKLEALMIIEAIELEEIFKSNGDQKVEIPNLKVVVFAHLPSLFEAQGIHFQLVKGRLLRNCQKLRPLTSTFVNYFPIGNFKYFPGFKIAVEAILLYEWTSRSLYSSQEQNVDVRKFLQITEVNDHQETTKDIVVGVASEIEAALGHTLTSSQIIMKQTPEVEHELQIPSVTVLPTSSKELKKEQPPSQQRLTNQQNPLGEIDTSIKPSQDVEEGTPLTNAKTITASTHSELIRSSQVKEQDVDVRDTLETTLINDERVSLNEDVVMKESPIIEEQFSKGDGFTILKSKPSPSNNVPMPLAFQAPSMHIEGNPSQNVEDLSSPYLVTRKLEELVSQKHLDYENLSLLTDFFVKHPSVLLSDKHSNGYKGHAYKFLTNLLKFLQTHSVLDVLGSCNSEFVELVHDVRSFSFDKDWLDGVEKRALFPDMEFSQDALQKLLDSKKQITEDVEVMRFKIDILTRDVEELKQQLSSSEAGLESVIQREKEIVESKASLSVPLGY 1795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1132g00004 1795 Gene3D Ribonuclease Inhibitor 716 871 IPR032675 -
Vivi1132g00004 1795 Pfam NB-ARC domain 157 393 IPR002182 GO:0043531
Vivi1132g00004 1795 SUPERFAMILY L domain-like 467 949 - -
Vivi1132g00004 1795 SUPERFAMILY RNI-like 1043 1291 - -
Vivi1132g00004 1795 FunFam Probable disease resistance protein At1g61300 132 297 - -
Vivi1132g00004 1795 PRINTS Disease resistance protein signature 337 351 - -
Vivi1132g00004 1795 PRINTS Disease resistance protein signature 821 837 - -
Vivi1132g00004 1795 PRINTS Disease resistance protein signature 241 255 - -
Vivi1132g00004 1795 PRINTS Disease resistance protein signature 169 184 - -
Vivi1132g00004 1795 Gene3D Ribonuclease Inhibitor 872 1307 IPR032675 -
Vivi1132g00004 1795 Gene3D - 135 299 IPR027417 -
Vivi1132g00004 1795 Gene3D - 303 395 IPR042197 -
Vivi1132g00004 1795 Coils Coil 1744 1778 - -
Vivi1132g00004 1795 Gene3D Ribonuclease Inhibitor 462 701 IPR032675 -
Vivi1132g00004 1795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 404 IPR027417 -
Vivi1132g00004 1795 MobiDBLite consensus disorder prediction 1474 1511 - -
Vivi1132g00004 1795 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1107 1332 - -
Vivi1132g00004 1795 Coils Coil 62 82 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1132g00004 170 487 WRKY Transcription Factor Family AT5G45050 24.706 1.77e-10 64.3