Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1132g00003 ATGGAAAGTTGCTTAGCTGATTTGGGAAAGGGCTATGCGGAGAAATTGATAAATGGGACATTAGCAGAATTACGTCATGTATTTTGCTTCACATGCACTGCTAAGGAATTCAAAGAAAAAAAGATTTGGCTGGAAGCAAAAATAAAAACAATGGAGCAACATGCTAAAGTGGCAGCAGGAAATAATAAAGATATTGAAGCTGATTATCATTTATGGAAAGAGAAAGCTGAAAAGCTCGTTCAAGAGGACATCCAAACAAAACAAAAATGCTTTTTTGGATTATGTCATGATTGCATATGGAGATATAAAAAGGGAAAGGAGCTGGCAAATAACATAGAAGAGATTAAGCAATTAACAGAAAAGGGAGGGACATTTGAAAATATTGAAATCTCTCGCCGTCTTCCGGATGTTGAACGCTACTCATCTAAAGAATACATTTCTTTTCCAAGTAGAGATTCAAAATACAAAGAGATTTTGGATGCAATAAAAGATGACAACAACTATATGATCGTATTGCAAGGGATGGGGGGCACCGGAAAAACTACATTGGCCAAAGAAGTGGGTAAAGAGCTAAAGTCTGAACAATTTGCTCATGTAATCGATACAACAGTCTCATTTACTCCTGATACAAAAAAAATTCAAGATGATATTGCTGGATCTTTAGGATTGAAATGGGAGGATTGTACTTACTCAGACCGAGCCAAAAAACTATGGAGCAGATTAACAACTGATGAAAAAGTTCTTATAATAATGGATGATGTGTGGGAAGGAGGCCCACCTCTTGATTTCGAGCTAATAGGAATTCCAAAACAGGACAATCACAAAGGTTGCAAAGTTCTTATAACCACACGCAGTAAACGAATATCCAATATTATGGGGTGTGATAAGATGATTGAATTAGATCTCTTACCTGAAGAAGAAGCATGGACCATGTTCAAAATGTATGCCGGTATAACCAATAATTCTTCAAAAAGTTTGATCGCCAAGGGACGTGGAATTGCTAAGGAGTGCAAACAATTGCCGGTTGCAATTGCAGTTATTGCCAAAAGTTTAAAAGGCCAACAAGATCGTAAGCACAAATGGGATACTACCTTAAAATTATTGAAGGAAATCGTTTCCATGGACGATGTTGATGAAGAAAAGGTTGGAATTTACAAATGTTTGAAGCTTAGCTATGATCTTATTAAGTATGAAAAATCCAAGAGATTATTTCTCTTAGCTTCTTTATTCCCAGAAGATAAAGAAATTCCTATTGAAATTCTAACTAGAATTGGCATTGGAACGGGCATTTTTGGAAAAAATTATGGAAGCTACAATGATGCTAGAAACCAAGTAGGTGTAGCTAAAGATAAACTCATAGATTCATGTTTGCTGGTGGGGGTCGATGAAAAACATGTAAAAATGCATGATTTGGTTCGTGAAGCGGCTCAATGGATAGGATACAAAGAGATTCGACATGTAAATTTGTCAAACATAGCTGAAAGATCGTCAGTTGAAAAGGAAAAAAATATGAAACATTTATTTTGTAAAGGGAAGGATATGGATTTGTTTTCCTGGAAGTATGATGGTTCCAAACTTGAGACTCTAATTCTCGATGTGGAAATGTATGAAGGCGATAAATGTATGGAAGCCCCAAATTCTTTCTTTGATAATGTTGACCAACTTCAAGTTTTGTACTTTTTAGGTCATGACAAACAACCCTTATCATTGCCACATTCAATTCACTCAATGTCAAAGATTCGATCGATACTGGTTGATGGAGTTGATTTAGGTGACATCTCTGTTTTGGGAAATCTGCAAAGTCTTGAGACTCTTGATTTTGTTGGTTGCATAATCAATGAATTACCAGACGAAATTGCAAAGTTGGGGAAATTTAAATTGTTAAACTTGGAATATTGTCAAATTAGAAGGAATGATCCATTTGAGGTTATTAAAAGATGCTCAACACTTGAAGAGTTGTACTTTATTGATAGTTTTAATGAATTTTGTCAAGAAATTACCTTACCCGAATTGCAAAGGTATCATATCCGGAACGGGTGGTGGACAATGCTTCCTGATTCACTATCAAAATATGTGTCTTTTAAAAAAATTGATGGCAACAAATATTTTTTTTCAAAACAAACATTCAAGTATCTCATGCAAACAACAGAGGTTCTTCAACTAGAGGAAATTAAGATGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTATAGATCAAGATATGAAAGATCTTATAGAGCTACGTCTTAGACGTATTTCAAAATTACAGTGCCTCATCGACACTAATGGTTCTCAATTTCTTAATGTATTGTCCAACTTGGTTATGTTAGAACTGGATGAAATGGAAAATTTGGAAGTACTATTCCATGGTTCTCTTTCTTTTGACTACTCTTTAAAGAATTTGGAGAAGGTATCAATAAAAAAGTGTAAAAAGCTTCGAATATTGTTCAATTGCAACCTAAATCTCTGCAATCTAAAGAGTTTGTCACTGTCAGATTGCCCATTGTTGGTTAACCTCTTTCCACTGTTAACTTCTCAGAGCCTGGTGCTGCTAGAGGAATTCAAGATAGCAGATTGTAAGGGATTGAAGAACATAGTAATAGATGATGGTGATAATAATGACAAGAGTCATGGCCCAATGTATCCAAAACTAAGATTTCTTTCTATTGTAAGATGTGATCAATTAGAATCAATATTTCCTTTCCTCTCTTTTGAAGACTTTTCAGTACTAGAAGTTATCAACATAACAAAATGTGATAAGCTACAATATATATTTGGCCAATATCAACATGTTGAACTCAAGTCATTGAAAGAGATAAAGCTTGGTGAATTACCAAATTTCATGGGAATCTTTCGAGAATATTCGCATTCCATGTCTTCGCTCGTGAAAGAGTTATCTTCCACTTCTAGAGATGGTTCCAAAGCACAAACAGAAGTGGATCCTATCAAATGCAACATCTTATCTTTGAATTGTTTATGTTGTCATGGTAATAACTATAGAAAGAAATCTGGGAGTATCTCAACTCCTAAAGTACCATTGGTTAATGAAGATCCAATGCAGAACAATTCATCAACATCAATATTAAGTTCACACCATCTTCATATATTGGAACATGCACAATGTTTTCCAGTACAACCGCATATCATGTCCAATATAAAAGAGCTTAAGCTATATGGGTTTTTGAAGATAAATTATGTGTTTATTCTTTCTATTACTCCAAGAATGTTGGTGGAAACTTTGACAGTTGAGAATTGTGATGAATTAAGGCACATAATAGTAGACATCGGAGATGATGATAGAGTTGGCAAAAGTTTAAGCAATGTGTTTCCAAAATTGAAAAAGCTTTACGTCAAAGATTGCATGCAATTGGAATACATATTTGGACACTACACTGATGACCATCTACCAGAATTGGAAGGTCTGACACTTAGCCATCTGCCAAAGTTTGTTGCCATGTGTCCCCAACAATATTGCCTGACATTTCCACCTTTGAAACAACTTGAACTCTCAGAATGGCCCTTGGTTGCTATCAAATCTATTGGCGAATTCATTATTAATCTTTCAGATTCAAAATCTCTTGACAATACAAACATGAAGGAATTGAGTGGGAGCATAGAACATTCTTTTGCCCTACAAAACCTTACAGAGATAAAAATCAAGGGATGTCAAAAATTGGAAATAGTTTTCTCCAATTCCATTTCAACATGCCTACCACAATTGTGTGATCTAAGAATAGAAAATTGCAAAGAATTGAAGCATATCATTGAAGATGACGACACGTCAAATTCTTTGTCTCCAAGGATATTCTTTCCAAAGTTAAAAACACTTATTGTAATAAAGTGTCGCAAATTGAAATGTGTCTTCCCGGTCTCCATATGCAAACAATTTTCTAAGTTAGAGGCTTTGATGATAATTGAAGCAATTGAACTTGAAGAAATATTCAAAAGCAATGGTGATCAGAAAGTCGAGATCCCAAATCTAAAAGTTGTAGTATTTGCCCACCTACCAAGCCTCTTCGAAGCCCAAGGAATTCATTTTCAGTTGGTAAAAGGTCGTTTACTACGAAATTGTCAAAAACTCAGGCCTTTGACTTCAACCTTTGTTAATTATTTCCCAATTGGGAATTTTAAATATTTCCCAGGTTTTAAGATTGCAGTTGAAGCAATATTACTATACGAGTGGACTTCTCGGAGTCTATACTCTTCACAGGAACAAAATGTTGATGTTAGAAAATTTCTACAAATTACCGAGGTTAATGATCATCAAGATGATGTCATGAATGTGCCTTTAGATGAGACCAAAGGTTACGATACTAGTAATAAGAATCCAAGTGCAGAAACTACAAAAGACATTGTTGTTGGTGTTGCGTCTGAAATTGAAGCAGCGTTAGGACACACGTTAACTTCTTCACAGATAATAATGAAACAAACACCAGAGGTAGAGCATGAATTACAGATACCATCAGTAACAGTATTACCAACAAGTTCAAAAGAGTTGAAAAAAGAACAACCGCCAAGTCAACAACGTTTGACAAATCAACAAAATCCACTTGGAGAAATCGATACTTCCATCAAACCTTCTCAGGATGTTGAAGAAGGAACTCCATTAACAAATGCCAAGACAATAACAGCCTCAACTCATTCTGAATTAATCAGATCATCACAAGTGAAGGAACAAGACGTTGATGTTAGAGACACTTTAGAAACTACTTTGATTAATGATGAACGAGTTTCTCTAAATGAAGATGTTGTCATGAAAGAAAGCCCAATTATTGAAGAACAGTTTTCTAAGGGTGATGGATTTACTATTTTGAAATCTAAGCCCTCTCCTAGCAATAATGTTCCCATGCCTCTTGCATTTCAGGCTCCTTCAATGCATATCGAAGGGAACCCTTCTCAAAATGTGGAAGATTTAAGTTCTCCTTATCTTGTCACGCGGAAGCTTGAGGAATTGGTTTCCCAAAAGCATTTGGATTATGAGAACTTGTCTTTGTTGACTGATTTTTTTGTTAAGCATCCTTCAGTTCTTCTAAGTGACAAACATAGTAATGGATATAAGGGCCATGCATACAAGTTCCTAACTAACCTATTGAAATTCCTCCAAACCCACAGTGTGTTGGATGTGCTAGGTTCTTGCAACTCTGAATTTGTTGAGTTAGTACATGACGTGCGCAGTTTTTCTTTTGACAAAGATTGGTTGGATGGAGTTGAAAAGCGCGCTTTGTTTCCTGATATGGAATTCTCTCAAGATGCATTGCAAAAATTATTAGATTCCAAGAAACAGATTACCGAGGATGTTGAAGTAATGCGTTTCAAGATTGACATTTTAACTCGAGATGTGGAAGAACTTAAGCAACAATTGTCCTCCTCTGAAGCTGGTTTAGAGAGTGTCATTCAACGAGAGAAAGAAATTGTAGAATCTAAAGCTTCTTTGAGTGTCCCTCTTGGCTATTAG 5457 0.3553 MESCLADLGKGYAEKLINGTLAELRHVFCFTCTAKEFKEKKIWLEAKIKTMEQHAKVAAGNNKDIEADYHLWKEKAEKLVQEDIQTKQKCFFGLCHDCIWRYKKGKELANNIEEIKQLTEKGGTFENIEISRRLPDVERYSSKEYISFPSRDSKYKEILDAIKDDNNYMIVLQGMGGTGKTTLAKEVGKELKSEQFAHVIDTTVSFTPDTKKIQDDIAGSLGLKWEDCTYSDRAKKLWSRLTTDEKVLIIMDDVWEGGPPLDFELIGIPKQDNHKGCKVLITTRSKRISNIMGCDKMIELDLLPEEEAWTMFKMYAGITNNSSKSLIAKGRGIAKECKQLPVAIAVIAKSLKGQQDRKHKWDTTLKLLKEIVSMDDVDEEKVGIYKCLKLSYDLIKYEKSKRLFLLASLFPEDKEIPIEILTRIGIGTGIFGKNYGSYNDARNQVGVAKDKLIDSCLLVGVDEKHVKMHDLVREAAQWIGYKEIRHVNLSNIAERSSVEKEKNMKHLFCKGKDMDLFSWKYDGSKLETLILDVEMYEGDKCMEAPNSFFDNVDQLQVLYFLGHDKQPLSLPHSIHSMSKIRSILVDGVDLGDISVLGNLQSLETLDFVGCIINELPDEIAKLGKFKLLNLEYCQIRRNDPFEVIKRCSTLEELYFIDSFNEFCQEITLPELQRYHIRNGWWTMLPDSLSKYVSFKKIDGNKYFFSKQTFKYLMQTTEVLQLEEIKMGWRNLMPEIVPIDQDMKDLIELRLRRISKLQCLIDTNGSQFLNVLSNLVMLELDEMENLEVLFHGSLSFDYSLKNLEKVSIKKCKKLRILFNCNLNLCNLKSLSLSDCPLLVNLFPLLTSQSLVLLEEFKIADCKGLKNIVIDDGDNNDKSHGPMYPKLRFLSIVRCDQLESIFPFLSFEDFSVLEVINITKCDKLQYIFGQYQHVELKSLKEIKLGELPNFMGIFREYSHSMSSLVKELSSTSRDGSKAQTEVDPIKCNILSLNCLCCHGNNYRKKSGSISTPKVPLVNEDPMQNNSSTSILSSHHLHILEHAQCFPVQPHIMSNIKELKLYGFLKINYVFILSITPRMLVETLTVENCDELRHIIVDIGDDDRVGKSLSNVFPKLKKLYVKDCMQLEYIFGHYTDDHLPELEGLTLSHLPKFVAMCPQQYCLTFPPLKQLELSEWPLVAIKSIGEFIINLSDSKSLDNTNMKELSGSIEHSFALQNLTEIKIKGCQKLEIVFSNSISTCLPQLCDLRIENCKELKHIIEDDDTSNSLSPRIFFPKLKTLIVIKCRKLKCVFPVSICKQFSKLEALMIIEAIELEEIFKSNGDQKVEIPNLKVVVFAHLPSLFEAQGIHFQLVKGRLLRNCQKLRPLTSTFVNYFPIGNFKYFPGFKIAVEAILLYEWTSRSLYSSQEQNVDVRKFLQITEVNDHQDDVMNVPLDETKGYDTSNKNPSAETTKDIVVGVASEIEAALGHTLTSSQIIMKQTPEVEHELQIPSVTVLPTSSKELKKEQPPSQQRLTNQQNPLGEIDTSIKPSQDVEEGTPLTNAKTITASTHSELIRSSQVKEQDVDVRDTLETTLINDERVSLNEDVVMKESPIIEEQFSKGDGFTILKSKPSPSNNVPMPLAFQAPSMHIEGNPSQNVEDLSSPYLVTRKLEELVSQKHLDYENLSLLTDFFVKHPSVLLSDKHSNGYKGHAYKFLTNLLKFLQTHSVLDVLGSCNSEFVELVHDVRSFSFDKDWLDGVEKRALFPDMEFSQDALQKLLDSKKQITEDVEVMRFKIDILTRDVEELKQQLSSSEAGLESVIQREKEIVESKASLSVPLGY 1818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1132g00003 1818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 404 IPR027417 -
Vivi1132g00003 1818 SUPERFAMILY RNI-like 1043 1289 - -
Vivi1132g00003 1818 FunFam Probable disease resistance protein At1g61300 132 297 - -
Vivi1132g00003 1818 Gene3D Ribonuclease Inhibitor 873 1306 IPR032675 -
Vivi1132g00003 1818 Coils Coil 1767 1801 - -
Vivi1132g00003 1818 MobiDBLite consensus disorder prediction 1497 1534 - -
Vivi1132g00003 1818 SUPERFAMILY L domain-like 464 864 - -
Vivi1132g00003 1818 SUPERFAMILY RNI-like 882 1090 - -
Vivi1132g00003 1818 Gene3D - 135 299 IPR027417 -
Vivi1132g00003 1818 PRINTS Disease resistance protein signature 169 184 - -
Vivi1132g00003 1818 PRINTS Disease resistance protein signature 337 351 - -
Vivi1132g00003 1818 PRINTS Disease resistance protein signature 821 837 - -
Vivi1132g00003 1818 PRINTS Disease resistance protein signature 241 255 - -
Vivi1132g00003 1818 Gene3D - 303 395 IPR042197 -
Vivi1132g00003 1818 Pfam NB-ARC domain 157 393 IPR002182 GO:0043531
Vivi1132g00003 1818 Gene3D Ribonuclease Inhibitor 500 872 IPR032675 -
Vivi1132g00003 1818 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1107 1334 - -
Vivi1132g00003 1818 Coils Coil 62 82 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1132g00003 170 487 WRKY Transcription Factor Family AT5G45050 24.706 1.78e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1132g00003 - - vvo:131593401 2516.49