Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1129g00011 ATGGGTTTATCTTCTCTTCACGTCTGCAATATGGATTCATCTGCAGATCACTGGTTGCAGGGCACAATTCACGATGAGTCAGGAATGGATTCATCTTCACCATTATCTGGTGACATGCTAACATGTTCAAGACCATCCTCCATGATAGATCAAAGGAGGCTAAGACCACCACATGACCTTTCTCTAAAATGTCCAAGATGTGATTCAACTCACACCAAATTCTGCTACTACAACAACTACAGTCTCTCTCAGCCTAGGTACTTCTGCAAGACTTGTAGAAGGTATTGGACCAAAGGAGGAACCCTAAGAAACATTCCTGTTGGTGGAGGTTGTAGAAAAAACAAGAAAGTTTCTTCCAAAAAACCTAATGATAATATTCAAAATCATATTCAAAACCAACCTCAACAAGGGTCTTCTTATTCATACCATCATCATAATCACAACAACAACAACCCTAAGGATCTTCATCTTTCTTTCCCTGATGTGCAATTCTCTCACCTTAGTAACTTACTAGGGAGTAGTACTTCTGGTGCATTAGGAAACCCTAATTTCAATGCTTGCATGCTTGAGAATCCTAGGCCTATTGATTTCATGATGGAGAGTAAACTAGAAGGCATAATTGGAAGTAGCTCTAGGAATTTTGATAACTTTTTTGGAAACAATGATCACATGAGTATGAACATGGGTGTTGGAGACATGATGAATGGTCAAAACCAAAATGTGCTTCAATTGCAACAGAATTTTCACTCTTCATTTGGTGGCATGTCATCATCATTTGATGGAAACAATAACAATGGAGGTTATTTAATGGATTCTTGTCAAAGACTCATGCTTCCATATGATGCTCATGATGAGGATCATAATGGTTCAATTGATGTGAAGCCAAACCCTAAACTACTATCTCTTGAATGGCAACAAGATCAAGGTTGCTCTGATGCTGGATATGGATCATGGAGTGGCATGATGAATGGTTATGGATCTTCCACAACAAACCCTTTGATCAACGGCTGA 1011 0.3897 MGLSSLHVCNMDSSADHWLQGTIHDESGMDSSSPLSGDMLTCSRPSSMIDQRRLRPPHDLSLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKPNDNIQNHIQNQPQQGSSYSYHHHNHNNNNPKDLHLSFPDVQFSHLSNLLGSSTSGALGNPNFNACMLENPRPIDFMMESKLEGIIGSSSRNFDNFFGNNDHMSMNMGVGDMMNGQNQNVLQLQQNFHSSFGGMSSSFDGNNNNGGYLMDSCQRLMLPYDAHDEDHNGSIDVKPNPKLLSLEWQQDQGCSDAGYGSWSGMMNGYGSSTTNPLING 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1129g00011 336 ProSitePatterns Zinc finger Dof-type signature. 64 100 IPR003851 GO:0003677|GO:0006355
Vivi1129g00011 336 MobiDBLite consensus disorder prediction 107 157 - -
Vivi1129g00011 336 ProSiteProfiles Zinc finger Dof-type profile. 62 116 IPR003851 GO:0003677|GO:0006355
Vivi1129g00011 336 MobiDBLite consensus disorder prediction 123 157 - -
Vivi1129g00011 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 51 237 IPR045174 GO:0003700|GO:0006355
Vivi1129g00011 336 Pfam Dof domain, zinc finger 61 116 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1129g00011 1 334 C2C2-Dof Transcription Factor Family AT5G62940 39.695 2.15e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi1129g00011 zf-Dof 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1129g00011 - - gmx:778107 417.157