Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1129g00005 ATGCAGTCCGCCGCTTTCACTCTCTCCCCTTCTCTCCCTCTCCGAAATCTCAACCGCCAAAACACCAACCGTTTAACTCGCTCCTCCACTAACCTCCGTCTCTCCGCCAAATTAAACGACGCCGTAAATCCCAATGGCGCCTCCTCTTCTTCCTCCTCCTCCTTCACTCGTAAATCATGGTCTATTTCTCCTTCTTCATCTTCCTCCTCTTCTTTCAAATTCAGACCTCTCCCTCTCCTTTCCACCTCCGATCTTTCTCCTCCTAAAGCCACATCCGAAAGCGCCGCTGAATCTGCTGATTCCGGTTCTTTGCTCAAAACTCTTCAACTTGGATCCTTGTTCGGATTGTGGTACCTCTTCAATATCTACTTCAATATCTACAATAAACAGGTTTTGAAGGCGTGCCATTTCCCTGTAACTGTTACTGTAGTTCAATTTGCTGTTGGGACTGTTCTTGTATCAGTTATGTGGGCTCTTAATCTCTACAAGAGACCTAAAATCAATGGCGCCATGCTTGCAGCTATATTTCCACTAGCTATTGTGCATACTTTGGGGAACCTTTTCACTAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTTACTCACACTATTAAAGCTATGGAGCCTTTCTTTTCGGTTATCCTTTCTGCCATGTTTCTTGGAGAGAGACCTACACCTTGGGTGATTGGTTCCCTTGTTCCTATTGTTGGTGGAGTTGCTCTGGCGTCTGTTACGGAGGCGTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATGTGACAAACCAATCACGTAATGTTCTTAGCAAAAAGGTCATGGTTAAACAAGAGGAATCCTTGGACAACATAACTCTCTTCTCTATAATAACAATAATGTCATTCTTCTTGTTAGCACCTGCTGCTATCTTCATGGAGGGTGTCAAATTCACCCCTGCTTACCTGCAATCTGCTGGATTAAATGTTAGACAAGTGTACACCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCATTCCGTCGGTAATTGTGTGAAGCGTGTTGTGGTTATTGTGAGCTCTGTCATCATCTTCAAAACACCTGTCTCGCCTGTGAATGCTTTAGGTACTGCTGTTGGTCTTGCTGGTGTTTTCCTCTACTCAAGGGTGAAGCGAATTAAGTCAAAGCCAAAGGCAGTTTAA 1233 0.4428 MQSAAFTLSPSLPLRNLNRQNTNRLTRSSTNLRLSAKLNDAVNPNGASSSSSSSFTRKSWSISPSSSSSSSFKFRPLPLLSTSDLSPPKATSESAAESADSGSLLKTLQLGSLFGLWYLFNIYFNIYNKQVLKACHFPVTVTVVQFAVGTVLVSVMWALNLYKRPKINGAMLAAIFPLAIVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTPWVIGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKQEESLDNITLFSIITIMSFFLLAPAAIFMEGVKFTPAYLQSAGLNVRQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTPVSPVNALGTAVGLAGVFLYSRVKRIKSKPKAV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1129g00005 410 Pfam Triose-phosphate Transporter family 108 398 IPR004853 -
Vivi1129g00005 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 300 401 - -
Vivi1129g00005 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 152 244 - -
Vivi1129g00005 410 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 108 408 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vivi1129g00005 410 PANTHER SOLUTE CARRIER FAMILY 35 109 404 - -
Vivi1129g00005 410 MobiDBLite consensus disorder prediction 40 73 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1129g00005 1 408 Antiporters AT5G33320 68.990 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1129g00005 K15283 - gmx:100804563 557.755