Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1124g00005 ATGGCTAGAAGAACTAGAACCTATGACAACGTTGTTGCTCATCTTCTGTTCTCTAACATAATGATCTTCTTCATTCCTATTGTCATCTCCCTCAGAAGCCTCACTCCAGACAAATCCATCAACTATAACGAGTTCCTAGTCTCCGAAACCGGAAAATTCAAAGCCGGGTTCACCAACATAGAGACTTCACCAAACATATACTTTTGTATATGGTACAAGAATCTCAACCCAAGGACAATTGTTTGGGTGGCCAATAGAGATACACCACTGCAAAACTCAACAGGAGTATTCAAATTCAAACTCAAACTCACTGATACAGGAAATCCAGTCATAGTTGATGGCTCGGAGAACACAATTTGGTTCTCTAATGCATCAACAGTTGTAGAGAATCCGTCTCTATTGCTCTTGGACTCCGGAAACATCGTTGTACAAAACGGAAGTGTTAATGATGTTTGGTGGCAAAGCTTTGATTATCCTGGTGATACTTTATTACCCGGGATGATTCTTCGAACTGATAGAATCACTGGAGCGCATAATTCTTTGATATCATGGAAAAACACAGGTGATCCTGCAAGAGGTGAGTTTTCGTATCATATAGATTCTAATGGTTTTCCGCAACTCTTTATTTCGAAAGGATCGGTGTTAGTTTATAGACTAGGCTCATGGAATGGATTTTTCTTCACTGGGATCCCTTGGGAAACACTCTATAGTTATTTCAAATTTTCTTTTGAGTTGACTGAGGAACAAGTTCGATTTAAATATGAACCGTTAAACGACACGATTGTTTCGAGATACCTTATCACTCCGACCGGCTTCGTGCAACGTTACATTTGGTTATATACGACCGAAACTTGGCAACTTTTCCTCGCTGGCCCTGGGGACCAGTGTGAGAATTATAACATATGTGGTGCGAATTCTGATTGTAATGTGGGGAACCAAGAGATATGCAAATGTCTCATTGGTTTCGCACCTAAATCGTCGAATGATAGTGACGGGTGTGTTAGGAAGGTGAAATTGGATTGTGACGATAGAGACGGATTTGTTAAGTATACAAAGATGAAGTTGCCGGATACGTCTGAGTCATGGTTTGATGAGAAAATGAATCTTGTGGAATGTGAGAAGCAATGCCGGAAAAATTGTAGTTGCATCGCTTATGCGAGTTTAAATATTAGAAATGGTGAAAGTGGATGCATCATTTGGTTCAATAACATCACTGATATGAGGACAGAAATCTTTGTTGGGCAAGAGATTTACATAAGAGTGGCTGCTTCAGAATTAGGTATTTTACTAGGAATCGGAATCCTCTTTTTGGGTATTACAACGGTCGGATATGTCATTTTTCTAAAGAGGAAAAATCTTCAGAAGTCAGGTAGGGACACGCCAATTAACCATGAAGATAACATGAATCATGAGAAGGAAAACATTGACATATCAACTTTTCATTTTTCTACCATAGCTAATGCCACTGACCAATTCTCCCAAATTAAGAAACTGGGAGAAGGTGGATATGGACCTGTTTACAAGGGTGTACTAGCAAATGGTAGAGAGATTGCTGTCAAGCGGCTTTCGATTAAATCTGTACAAGGACCACAGGAATTTCAAAATGAAGTTATATTGATTGCAAATCTTCAGCATAGAAATCTTGTGAAACTCATTGGTTGTTGTATTCATAATGATGAAAGAATATTGATTTATGAATACATGCCTAACAGAAGTTTGGACAAATTTATTTTCGATCGAACTAAAAGTCAAGTATTGGATTGGAACACACGTTTTCATATTATAAGCGGGATTGCACGAGGACTTCTGTATCTTCATCAAGATTCTAGAGTAAGAATCATCCATAGAGATCTAAAAACCAGTAATATTCTTCTTGATAATGATATGAACCCAAAGATATCAGACTTTGGACTCGCTAGAGCTTTTGGCGGAGATCATGACGAGGCTAATACAGTCAGAGTAGTGGGAACTCATGGTTACATGCCTCCAGAGTATGCTGTATATGGATCTTTTTCAGTAAAGTCGGATGTCTTCAGTTTCGGTGTTATTGTTCTAGAAATTGTTAGTGGGAGGAAGAGCAGAGAATTTTTCAACCCGGAACATAATCTTAACCTTATTGGACAAGCTTGGAGATTGTGGAGTGAGGATAAACAATTGGAACTGATAGATGAGTCCCTTAAAGGTTCAGTTATTATGGATGAGGCATTAAAATGTATTCACATAGGACTCTTATGTGTGCAAGATAGAGCAGATGATAGGCCTGAAATGTCATCTGTTGTTCTAATGATGAATGGGGAGAGAGCATTGCCTAATCCAAGGCAGCCAGGGTTTTATCCACATGAAGTTGTGTCTTACTCAAGCAAACAAGAATTGTCATCAACAAATGAAATTTCTATTTCAATGTTACACCCAAGATAA 2418 0.3859 MARRTRTYDNVVAHLLFSNIMIFFIPIVISLRSLTPDKSINYNEFLVSETGKFKAGFTNIETSPNIYFCIWYKNLNPRTIVWVANRDTPLQNSTGVFKFKLKLTDTGNPVIVDGSENTIWFSNASTVVENPSLLLLDSGNIVVQNGSVNDVWWQSFDYPGDTLLPGMILRTDRITGAHNSLISWKNTGDPARGEFSYHIDSNGFPQLFISKGSVLVYRLGSWNGFFFTGIPWETLYSYFKFSFELTEEQVRFKYEPLNDTIVSRYLITPTGFVQRYIWLYTTETWQLFLAGPGDQCENYNICGANSDCNVGNQEICKCLIGFAPKSSNDSDGCVRKVKLDCDDRDGFVKYTKMKLPDTSESWFDEKMNLVECEKQCRKNCSCIAYASLNIRNGESGCIIWFNNITDMRTEIFVGQEIYIRVAASELGILLGIGILFLGITTVGYVIFLKRKNLQKSGRDTPINHEDNMNHEKENIDISTFHFSTIANATDQFSQIKKLGEGGYGPVYKGVLANGREIAVKRLSIKSVQGPQEFQNEVILIANLQHRNLVKLIGCCIHNDERILIYEYMPNRSLDKFIFDRTKSQVLDWNTRFHIISGIARGLLYLHQDSRVRIIHRDLKTSNILLDNDMNPKISDFGLARAFGGDHDEANTVRVVGTHGYMPPEYAVYGSFSVKSDVFSFGVIVLEIVSGRKSREFFNPEHNLNLIGQAWRLWSEDKQLELIDESLKGSVIMDEALKCIHIGLLCVQDRADDRPEMSSVVLMMNGERALPNPRQPGFYPHEVVSYSSKQELSSTNEISISMLHPR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1124g00005 805 Gene3D - 29 156 IPR036426 -
Vivi1124g00005 805 SMART serkin_6 492 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1124g00005 805 ProSiteProfiles Protein kinase domain profile. 492 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1124g00005 805 Gene3D Transferase(Phosphotransferase) domain 1 568 771 - -
Vivi1124g00005 805 CDD PAN_AP_plant 337 422 - -
Vivi1124g00005 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Vivi1124g00005 805 Pfam Protein kinase domain 492 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1124g00005 805 SMART ntp_6 342 421 IPR003609 -
Vivi1124g00005 805 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Vivi1124g00005 805 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 567 - -
Vivi1124g00005 805 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 771 - -
Vivi1124g00005 805 CDD B_lectin 43 159 IPR001480 -
Vivi1124g00005 805 Gene3D Hepatocyte Growth Factor 338 415 - -
Vivi1124g00005 805 SMART blect_4 37 159 IPR001480 -
Vivi1124g00005 805 Pfam D-mannose binding lectin 79 185 IPR001480 -
Vivi1124g00005 805 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 753 - -
Vivi1124g00005 805 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Vivi1124g00005 805 PIRSF SRK 6 805 IPR024171 GO:0004674
Vivi1124g00005 805 Gene3D Phosphorylase Kinase; domain 1 465 567 - -
Vivi1124g00005 805 SUPERFAMILY Protein kinase-like (PK-like) 476 789 IPR011009 -
Vivi1124g00005 805 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Vivi1124g00005 805 CDD STKc_IRAK 498 765 - -
Vivi1124g00005 805 Pfam PAN-like domain 341 407 IPR003609 -
Vivi1124g00005 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 190 IPR036426 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1124g00005 469 805 Receptor kinase-like Gene Family AT3G45860 52.368 9.44e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1124g00005 Pkinase 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1124g00005 - - gmx:106794307 947.962