Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1124g00004 ATGGCTGAAAAACACCACAAAAACAAAAAAAAAAATTTACCAATTTCAACTTCAAATCTCAATGATCCCAAGAAACAATTAAACAAGGAAAATCATGACAAAGATTTAGAATCACTGCCGGAGCCCGATCCTCCGACAACTTTACCGGCAGTCTCCTCGCCGGACCCCACACCGGCGCTGCCTCGGCCAAAGTCTCCTCTGCCACCTAAAGTATTACCGCCGTTAGAATCACCTTCAGAACCACCACCAACACCGTCACCACCACCATCACCACCACCATCATCATCACCACCACCTCCAGAACCTTCACCACCACCTCCAGAACCTTCACCGCCACCTCCAGAACCTTCTCATCCACCTCCGTCACTATCCCCACCGCCACCACAATTATCACCTCCGACAGTGCACAATGCAAACTCCTCAATATCTCCTCCTCGTTCATCACATAAACAACCACCTCCCTCGCCTCCTGAGAGGCCATCTTCATCATCTTCTTCGTCTTCTACACCGTCTAATGATTCGCCACATAAAGCTATGCATGAAAAATCAAGAGACTCTCATTCGCCTGCATCCTCGCCTGTCGAAATAGTTGGTTATACCCTGGCCGGAGTTTTGGTTGTCTCCTTAGTTGTCTTCGCCGTTTTTCTCACTTTTAGGAAGAAGAAAACGAAAGGAGATGCTTATGGTGGAGCCTTTATGCCACCTCCTGGAACTAACTTTCAGGTTAAATCAGGTGCTGATGGGCTTTACTATGTACAGCAACCTTCCTTTAGAAATAACTATGCCAAAGGGAACGCTGGAGCAAACAGCAAGAAGCATTTACGACGAGGTTCTATGGAATCTGTACAGCCCCTGAGTGCTCAAGTAGTTTTTAGTTATGACATGGTAAAAGAAATAACCAATGCGTTTTCTAGTCAGAATGTGATAGGGGAAGGGGGATTTGGGTGTGTTTACAAGGGTCGGCTTATGGATGGAAAAGATGTGGCAGTCAAGCAACTTAAAGTTGGTAGTGGGCAGGGAGATAGGGAATTCAGGGCGGAAGTGGAGATTATTAGCCGTGTTCATCATCGACATTTGGTATCGTTGGTTGGTTATTGCATTTCTGAGCAGCAAAGAATGCTTATATATGAGTTCGTTCCTAATGGAAATCTTCATCATCACTTGCATGGAAGTGGAGTGCCAGTGTTGGATTGGGCCAAGAGGCTGAAGATAGCTATTGGTGCTGCAAAGGGTCTGGCGTATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAATCACCCAACATACTTCTGGATGATGCTTTTGAGGCACAGGTTGCAGACTTTGGGCTTGCAAGGCTAACAGATGCTGCCAATACCCATGTATCAACAAGGGTTATGGGTACCTTTGGGTACATGGCTCCTGAATATGCAACAAGTGGAAAATTAACAGATAAATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTCGAGCTTGTAACCGGAAGGAAACCGATTGATGAAAACCAGCCTTTAGGAGACGAGAGTTTGGTTGAGTGGGCTCGTCCACTACTGATCCACGCCTTTATGACACGCGAGTTTGGTGAACTAGTAGATCCGAGACTAGAAAATAACTACGTAGAGAGTGAAATGTTCGGAATGATAGAAGCAGCCGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGGCCTCGTATGTCTCAGGTGGTAAGAGCTTTAGACAGTGGAGACGACATATCTGATTTATCAAACGGGGTGACATACGGTCAGAGCACTGTCTATGATTCTGGCCAGTACGACAAAGAGATCATGCTATTCAGGAGAATGGCCAATGAAAGCTACGGTGATTCTGATCTTGATAAAAACAGCGGAGAATCCAATCCTTCGAAAGAGAATTTGAGATCACAGCATTCATGGATGCACAGTACTTCGAGTACCGAGTCAGAATCAAGAGCTTTCAATAAGCATAAAGTCAGTCATGAATGA 1995 0.4556 MAEKHHKNKKKNLPISTSNLNDPKKQLNKENHDKDLESLPEPDPPTTLPAVSSPDPTPALPRPKSPLPPKVLPPLESPSEPPPTPSPPPSPPPSSSPPPPEPSPPPPEPSPPPPEPSHPPPSLSPPPPQLSPPTVHNANSSISPPRSSHKQPPPSPPERPSSSSSSSSTPSNDSPHKAMHEKSRDSHSPASSPVEIVGYTLAGVLVVSLVVFAVFLTFRKKKTKGDAYGGAFMPPPGTNFQVKSGADGLYYVQQPSFRNNYAKGNAGANSKKHLRRGSMESVQPLSAQVVFSYDMVKEITNAFSSQNVIGEGGFGCVYKGRLMDGKDVAVKQLKVGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEQQRMLIYEFVPNGNLHHHLHGSGVPVLDWAKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSPNILLDDAFEAQVADFGLARLTDAANTHVSTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELVTGRKPIDENQPLGDESLVEWARPLLIHAFMTREFGELVDPRLENNYVESEMFGMIEAAAACVRHSAPKRPRMSQVVRALDSGDDISDLSNGVTYGQSTVYDSGQYDKEIMLFRRMANESYGDSDLDKNSGESNPSKENLRSQHSWMHSTSSTESESRAFNKHKVSHE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1124g00004 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Vivi1124g00004 664 ProSiteProfiles Protein kinase domain profile. 303 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1124g00004 664 MobiDBLite consensus disorder prediction 1 191 - -
Vivi1124g00004 664 PRINTS Proline rich extensin signature 80 92 - -
Vivi1124g00004 664 PRINTS Proline rich extensin signature 43 55 - -
Vivi1124g00004 664 PRINTS Proline rich extensin signature 93 114 - -
Vivi1124g00004 664 PRINTS Proline rich extensin signature 58 74 - -
Vivi1124g00004 664 Gene3D Transferase(Phosphotransferase) domain 1 379 589 - -
Vivi1124g00004 664 SUPERFAMILY Protein kinase-like (PK-like) 281 576 IPR011009 -
Vivi1124g00004 664 CDD STKc_IRAK 309 577 - -
Vivi1124g00004 664 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1124g00004 664 Pfam Protein tyrosine and serine/threonine kinase 306 575 IPR001245 GO:0004672|GO:0006468
Vivi1124g00004 664 MobiDBLite consensus disorder prediction 42 133 - -
Vivi1124g00004 664 MobiDBLite consensus disorder prediction 631 652 - -
Vivi1124g00004 664 Gene3D Phosphorylase Kinase; domain 1 264 378 - -
Vivi1124g00004 664 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 204 625 IPR047117 -
Vivi1124g00004 664 MobiDBLite consensus disorder prediction 618 664 - -
Vivi1124g00004 664 MobiDBLite consensus disorder prediction 25 40 - -
Vivi1124g00004 664 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Vivi1124g00004 664 FunFam proline-rich receptor-like protein kinase PERK8 379 591 - -
Vivi1124g00004 664 FunFam Proline-rich receptor-like protein kinase PERK8 275 378 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1124g00004 144 613 Trihelix Transcription Factor Family AT1G70460 59.674 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Vivi1124g00004 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1124g00004 - - gmx:100797563 641.728