Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1113g00009 ATGGCACCACAAATGCAAATTCAAACACCAAACACTAATAACACCACTGAAAACAGTAACCATACATCATCTTCGGTTGTCGGTCCTCGCCCCCGAGGGCGTCCCCTTGGGTCGAAGAATAAGTCTAAGGTTCCTGTCACAAACACAAGTGGCAATCCTGATGGCCATGTTTTTGAGATATCTGCTGGAGCAGATGTCTCAAAGAGTATCTTTAATTATGTTTGTCGTCGAAGGAGACGCATAAACATCATTAGTGGAAATGGAGAGGTGGCGCAAGCTACACTTCGTCAATCCACAGGAAAAGTTGTAACTCTTCGTGGAAGATTCCAAATTATTGCGATATGTGGAACAATTTTTCCTTCGCATGCACCAAGGATGGAGTGTGGATTGGAAGTTTTATTGTCTGGTACTGAAGGACAAGTGGCTAGGGGTAATGTGATTCCCCCTTTGGTGGCTTTCAACTCCGTGTTTTTGGTTGGAACTCCTATTGCAAAAATTGTATTTGAAAATGTGTCTTTGGAAGCTTACAACCAGAATAAACAAAAAGAAGTTAGCTGTGATGCAAATGGACATGTGGCAAAAGGTGGTGGTGGTTTGTTAAATGGTGAAGGATCAACAACTTAA 624 0.4231 MAPQMQIQTPNTNNTTENSNHTSSSVVGPRPRGRPLGSKNKSKVPVTNTSGNPDGHVFEISAGADVSKSIFNYVCRRRRRINIISGNGEVAQATLRQSTGKVVTLRGRFQIIAICGTIFPSHAPRMECGLEVLLSGTEGQVARGNVIPPLVAFNSVFLVGTPIAKIVFENVSLEAYNQNKQKEVSCDANGHVAKGGGGLLNGEGSTT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1113g00009 207 MobiDBLite consensus disorder prediction 1 53 - -
Vivi1113g00009 207 Pfam Plants and Prokaryotes Conserved (PCC) domain 56 159 IPR005175 -
Vivi1113g00009 207 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 195 IPR014476 GO:0003680
Vivi1113g00009 207 SUPERFAMILY AF0104/ALDC/Ptd012-like 54 168 - -
Vivi1113g00009 207 CDD DUF296 56 152 IPR005175 -
Vivi1113g00009 207 MobiDBLite consensus disorder prediction 1 27 - -
Vivi1113g00009 207 Gene3D - 55 192 - -
Vivi1113g00009 207 ProSiteProfiles PPC domain profile profile. 48 184 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1113g00009 13 174 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 43.750 8.29e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1113g00009 - - vvo:131651779 173.326