Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1106g00003 ATGGCGACCTCTTTCAATCCACCAATCGCCTTTCGCTTCCTCAAATCGCCACTTTCCTCTTTTCCTTTATCACCGTCCTCACTTCCCCAATCGCATTGCACCTTCAAATTCCCAACCACTCGCTGCCGTTACTCATCTCTTGAAGTTAAAGATGTTAGTTATCAACCTCCAGGGACTCAGCTTAACCTTCTCAATTCAGTTAGTTTTTCTCTTCCGGAGAAAAGTTTTGGTCTAATTTTTGGACAAAGTGGAAGCGGAAAAACAACACTGTTGCAGCTTCTTGCAGGAATAAGCAAACCAACATCTGGATCTATTTACATCCAAAAATATGGGGATGATGGAAATCCTAGTCAATCTCCGGAGCCCTTGGTGCCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCAGAGAGGTATTTTGTTGCTGATACTGTACTTGAAGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAATGATCAATTAAGGGAGAAACTTGCTCTAGGGCTTCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATATCATTGGATAAGAATCCTCACTCCCTCAGCGGTGGTTACAAACGTCGCCTTGCCTTGGCAATACAGTTAGTGCAAGTCCCTGATTTATTAATACTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCGCGTGCAGATGTTGTGAAGCTTTTAAAGCATCTAAAAAAAGAATTAACTGTGCTAGTTGTCAGCCATGACTTGAGAGATTTTGCGAGTCTAGTTGATCAATCATGGAGGATGGAAATGGGTGGCAATCTTAAACAGGAGTTACTACCATTATAA 825 0.4291 MATSFNPPIAFRFLKSPLSSFPLSPSSLPQSHCTFKFPTTRCRYSSLEVKDVSYQPPGTQLNLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGDDGNPSQSPEPLVPERVGIVFQFPERYFVADTVLEEVTFGWPRQKGNDQLREKLALGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQVPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLRDFASLVDQSWRMEMGGNLKQELLPL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1106g00003 274 PANTHER HEAVY METAL TRANSPORTER 47 270 - -
Vivi1106g00003 274 Gene3D - 37 272 IPR027417 -
Vivi1106g00003 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 264 IPR027417 -
Vivi1106g00003 274 SMART AAA_5 73 265 IPR003593 GO:0016887
Vivi1106g00003 274 FunFam ABC transporter I family member 11 chloroplastic 37 272 - -
Vivi1106g00003 274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 274 IPR003439 GO:0005524
Vivi1106g00003 274 Pfam ABC transporter 64 217 IPR003439 GO:0005524
Vivi1106g00003 274 CDD ABC_cobalt_CbiO_domain1 48 264 IPR015856 GO:0005524|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1106g00003 47 264 Calmodulin-binding Proteins AT2G36910 25.652 3.23e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1106g00003 - - vun:114196181 425.246