Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1106g00002 ATGGAGAACAATTATTCCATGTTGTTTCCTTGTCCTCCTTCTTCAAGCTACACAATTCCATCTAGTAGTTTGAATAATGGTCAAAGCTCAAATGCATTTCTAGGTTTGAAGCCTAGTGATAGTAATATGGATCATCATCATCATGATGATGATGAAGATCATGTGAAAGAAGATGAAGCAAGTGTTAAAAAGAAAGGAGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGGAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGTTACTATAGGTGTACACATCAAGGGTGCAATGTGAAGAAACAAGTGCAACGTTTAACCAAAGATGAGGGAGTAGTGGTGACAACATATGAGGGAGTTCATACTCACCCTATTGAGAAAACAACTGATAACTTTGAGCATATCTTGAGTCAAATGCAAATATACACTCCCTTTTGA 498 0.3574 MENNYSMLFPCPPSSSYTIPSSSLNNGQSSNAFLGLKPSDSNMDHHHHDDDEDHVKEDEASVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1106g00002 165 MobiDBLite consensus disorder prediction 1 37 - -
Vivi1106g00002 165 Pfam WRKY DNA -binding domain 87 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1106g00002 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 148 IPR044810 GO:0003700
Vivi1106g00002 165 MobiDBLite consensus disorder prediction 1 74 - -
Vivi1106g00002 165 FunFam WRKY transcription factor 57 72 146 - -
Vivi1106g00002 165 SUPERFAMILY WRKY DNA-binding domain 78 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1106g00002 165 Gene3D WRKY domain 72 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1106g00002 165 MobiDBLite consensus disorder prediction 40 66 - -
Vivi1106g00002 165 ProSiteProfiles WRKY domain profile. 81 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1106g00002 165 SMART WRKY_cls 86 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1106g00002 25 165 WRKY Transcription Factor Family AT5G13080 65.333 7.37e-60 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi1106g00002 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1106g00002 - - vvo:131633258 294.664