Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi109g00015 ATGGCTGAAAGGCTGCCCATAGGAGCAGCTAGGAATGTCAGATCACCCTCTAACTCCACTCCTGGTTCCAATGACTTGAACATTGCTTCCATCGATAGATTAAATATTCAAGCAACAAGCCCAGAATCAGACGTAACTGGATCATATAGCCAGTTATCTTCAAATGGATCAAGCACTGTCACCGACCGTTCTGCTGGTCACTGTAAACATAGTCAATCAGATGCAGCTAGCAGAAATGGGAGCAAACCAAAGGAGAATGAGTCCCGTAATGAGAGCGAGTGGGTTGAGCAAGATGAGCCTGGTGTATATATTACTCTGACTTCCTTAGCAAGCGGTGCAATAGATCTCAAGAGGGTTCGGTTCAGTCGCAAACGGTTTAGTGAGAAACAAGCAGAACATTGGTGGGCTGAAAATCGAGTAAGAGTATATGAACAGTACAATGTGCGCACGATTGACAAGTCAACCATTGGTATTGGGAGTATGGACCTGGCTCATTGA 498 0.4518 MAERLPIGAARNVRSPSNSTPGSNDLNIASIDRLNIQATSPESDVTGSYSQLSSNGSSTVTDRSAGHCKHSQSDAASRNGSKPKENESRNESEWVEQDEPGVYITLTSLASGAIDLKRVRFSRKRFSEKQAEHWWAENRVRVYEQYNVRTIDKSTIGIGSMDLAH 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi109g00015 165 MobiDBLite consensus disorder prediction 39 97 - -
Vivi109g00015 165 Pfam Transcription factor regulating root and shoot growth via Pin3 91 146 IPR013591 -
Vivi109g00015 165 MobiDBLite consensus disorder prediction 1 27 - -
Vivi109g00015 165 Pfam Unstructured region between BRX_N and BRX domain 19 85 - -
Vivi109g00015 165 ProSiteProfiles BRX domain profile. 92 147 IPR013591 -
Vivi109g00015 165 MobiDBLite consensus disorder prediction 80 96 - -
Vivi109g00015 165 PANTHER PROTEIN BREVIS RADIX-LIKE 1 39 146 IPR044532 -
Vivi109g00015 165 MobiDBLite consensus disorder prediction 39 79 - -
Vivi109g00015 165 MobiDBLite consensus disorder prediction 12 27 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi109g00015 93 156 Major Intrinsic Protein MIP AT1G31880 48.438 3.57e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi109g00015 - - gmx:100797527 248.44