Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1093g00016 ATGGTTATCTCATCAACTGTCAAACATCCAGACGAACAAAGTGAGAGCATAGACTGTACTTTTGCTTCTAGATACGTACGTGAACTAGTTCCAAAGTTCAAGTTGTCAGAGAGTTCTATTCCAAAAGATGCAGCATATCATATGATAAATGATGAGTTGATGTTAGATGTGAAACCAAGGCTGAACTTGGCTTCGTTTGTGACTACTTGGATGGAACCTGAGTGTGATAAGCTTATCATGGATTCACTTAACAAGAACTATGTTGGCATGGATGAGTATCCTGTCACCACTGAGCTGCAGAACCGGTGTATGAATATAATAGCACATCTCTTCCATGCTCCTATTGGTAAAGAAGAAACAGCAGTAGGTGTCAGAACTGTAGGATCAGAGGCAATAATGTTAGCTGGTTTAGCTTTTAAAAGGAAATGGCAGACAAAGAGAAAATTAGAAGGCAAACCTTACGATAAGCCCAACATTGTTACCGGCGCTAATGTGCATATTTGTTGGAAAAAATTTGCTAGGTACTTTGAGGTTGAATTAAAGGAAGTGAAACTCACAGAGGGATACTATGTGATGGATCCATTGAAAGCAGTTGAAATGGTTGATGAGAACACCATCTGCGTTGCAGCCATTTTGGGTTCAACGCTGACCGGAGAGTTTGAGGATGTGAAGCTTCTTAACGAACTTCTTACTATAAAGAACAAAGAAACGGGATGGGATACACCGATTCATGTTGATGCTGCAAGTGGTGGTTTTGTGGCTCCGTTTCTCTACCCTGATCTGCTATGGGATTTTCGCTTGCCGTTGGTGAAAAGTATCAATGTTAGCGGTCACAAGTACGGTCTTGTCTACCCTGGTATTGGTTGGGTTGTCTGGAGGAATCAAGATGACTTGCCGGATGATCTTGTTTTTCATATCAATTATCTTGGATCTGATCAACCAACTTTCACATTGAATTTCTCCAAAGGATCGAGTCAAATCATTGCTCAATACTACCAATTCATACGACTTGGATTTGAGGGCTACAAAAATGTGATGAAAAATTGCTTGGCGAACACAAGAATTCTGAAAGAAGGAATTGAAAAAACTGGAAAGTTTAAAATTGTGTCCAAGGATATCGGAGTGCCAATTGTAGCCTTTTCCTTGAAAGACAGTAGCCGACACACAGTATTCGAGATAGCAGACCATTTGAGAAAATACGGATGGATAGTTCCGGCCTACACAATGCCTGCGGACGCGCAACACGTCGCGGTCCTCCGAGTGGTGATCAGGGTGGATTTTAGCCGCATCTTGGTTGAGAGATTTGTTTCTGATATTTGCAAAGTTGTGACTCTGTTGGAGACACTTTCGAGTACTATCTCCTCGAAAAGTGCTCATGTCGCGGTTATCGCCAGTGAGACTAGCTAG 1407 0.4179 MVISSTVKHPDEQSESIDCTFASRYVRELVPKFKLSESSIPKDAAYHMINDELMLDVKPRLNLASFVTTWMEPECDKLIMDSLNKNYVGMDEYPVTTELQNRCMNIIAHLFHAPIGKEETAVGVRTVGSEAIMLAGLAFKRKWQTKRKLEGKPYDKPNIVTGANVHICWKKFARYFEVELKEVKLTEGYYVMDPLKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTIKNKETGWDTPIHVDAASGGFVAPFLYPDLLWDFRLPLVKSINVSGHKYGLVYPGIGWVVWRNQDDLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMKNCLANTRILKEGIEKTGKFKIVSKDIGVPIVAFSLKDSSRHTVFEIADHLRKYGWIVPAYTMPADAQHVAVLRVVIRVDFSRILVERFVSDICKVVTLLETLSSTISSKSAHVAVIASETS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1093g00016 468 Gene3D - 363 449 - -
Vivi1093g00016 468 SUPERFAMILY PLP-dependent transferases 8 445 IPR015424 -
Vivi1093g00016 468 PANTHER GLUTAMATE DECARBOXYLASE 1 459 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi1093g00016 468 FunFam Glutamate decarboxylase 7 68 - -
Vivi1093g00016 468 Pfam Pyridoxal-dependent decarboxylase conserved domain 42 383 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vivi1093g00016 468 NCBIfam glutamate decarboxylase 20 446 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi1093g00016 468 FunFam Glutamate decarboxylase 69 362 - -
Vivi1093g00016 468 FunFam Glutamate decarboxylase 363 450 - -
Vivi1093g00016 468 Gene3D - 1 68 - -
Vivi1093g00016 468 Gene3D - 69 362 IPR015421 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1093g00016 12 454 Calmodulin-binding Proteins AT3G17760 78.604 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1093g00016 K01580 - gmx:100796475 797.349