Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1093g00014 ATGAATGCTCCGACGAAGAAAAAGATTGAAAAGAAGTGCAAAATTAGAGGGTACAATATCAAACTCGAAGCCCTCGACGAGATCCTCTCCTTCGTCACTCGATTCGAACTCACCGAACAAGACGAAGCCACCGATCTCGTCCTCGATCAGCTTGAACACGAATCCATCAAATCTACAGTAATCGACGTGGAGCCAGTTCAACGAGTGGTGAACTTGCTACTGGAAGCCGACGAGGCGGGTGAAACCTTTGAAACATTCGCTTCATCTTCTTCTTCGGCTATTGTCATCATTGATGTGTTCGATGTTCCTAGATATAAATATGACGCGATCAGAAGGAATTTCTACCAGTACCCAGGAAGCTTATCTCTTCACGGAGATGCAGCAGCCAAATCTGCTTTGTACAGGGATAGATTTCTGTTGTTGTCCCAGAGGCTTTCTCGTCATCAAGATTTTTCAAAACCTGCTTTTGAGTCTGAACTTTCCCAATTCAGGAGTCGTGAGATATCTCCTATCCAATCTCTAGTTGGGCAAAAAGGTAGACGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGGCATTTTTATTTGGAAGACCTTACCGCTTCTGTTAAAATCAGTTTATCTGATGCTAAGATTACTACGGGATTCTTCTTAGAGAACACCATAGTTGTGGCTGAAGGCGAGATGATATCTGCAGAGGGTATTTTTCAGATTTATTCATGTGGATTTCCCCCACCAGAGGATAGAGATAAATCACTTCAAGTGCTTGCAGGCCATGACTTTTTCGGTGGTGGTACTTTTACAAAAGAAGAAACGATCAGACAGGAAGAGATGGAGAAAAGAGCAGTCAATGACATGTTTGTCATACTATCTGATATTTTTGTAGACAAAGAAGAGTCTATGGGAAAGCTGGAGATTGTTCTTGATGGTTTTGAGAGTGAGGAAGTCGTTCCTTCCTTATTTGTTTTCATGGGAGACTTCTGTTCTGTGCCATATAGCCAAGCATCAGGCCCTTTCTCAATCCTAAGGTTGCAGTTTGGCAGGCTAGGGAAAATTATTGCAGCCCGTCCAAGGTTAAAGGAGAACAGCCGATTTCTTTTCATTCCAGGTCCTGGTGATATAGGTCCTTCAACAGTCCTTCCTAGGTGTAGATTACCTAAATGTTTAACTGAGGAGCTCCAAAAGTATATTCCCGATGCCATATTTTCAAGCAATCCATGCAGGGTAAAATTCTATACACAAGAAATTGTGTTTTTCCGGCAGGATCAGCTGTATCGCATGAGTCGTTCTTCTCTAGTGCCACCTTCTGTGACAGAAACTACTGATCCTTTTCAGCATTTTGTTGCCACCATAACCCACCAGAGTCATCTCTGTCCACTACCTCTAACTAAACAGCCCATCATATGGAATTATGACCATGGCCTTGATTTATATCCAACTCCGCACACGATTGTCTTGGGAGAGAGAAGTCCACAGAAGGCTTTTAAATACACAGGAACCACTTGTTTTAATACTGGATCCTTCTCGATGGATAGCACATTTGTAGTGTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCATCCTTGTGA 1593 0.4288 MNAPTKKKIEKKCKIRGYNIKLEALDEILSFVTRFELTEQDEATDLVLDQLEHESIKSTVIDVEPVQRVVNLLLEADEAGETFETFASSSSSAIVIIDVFDVPRYKYDAIRRNFYQYPGSLSLHGDAAAKSALYRDRFLLLSQRLSRHQDFSKPAFESELSQFRSREISPIQSLVGQKGRRWVMGVISQLEDGHFYLEDLTASVKISLSDAKITTGFFLENTIVVAEGEMISAEGIFQIYSCGFPPPEDRDKSLQVLAGHDFFGGGTFTKEETIRQEEMEKRAVNDMFVILSDIFVDKEESMGKLEIVLDGFESEEVVPSLFVFMGDFCSVPYSQASGPFSILRLQFGRLGKIIAARPRLKENSRFLFIPGPGDIGPSTVLPRCRLPKCLTEELQKYIPDAIFSSNPCRVKFYTQEIVFFRQDQLYRMSRSSLVPPSVTETTDPFQHFVATITHQSHLCPLPLTKQPIIWNYDHGLDLYPTPHTIVLGERSPQKAFKYTGTTCFNTGSFSMDSTFVVYRPCSQEVELSSL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1093g00014 530 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 2 530 IPR016266 GO:0003677|GO:0006261|GO:0008622
Vivi1093g00014 530 Gene3D - 2 72 - -
Vivi1093g00014 530 PIRSF DNA_pol_epsilon_2 1 530 IPR016266 GO:0003677|GO:0006261|GO:0008622
Vivi1093g00014 530 Pfam DNA polymerase alpha/epsilon subunit B 288 493 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1093g00014 16 499 Core DNA Replication Machinery Family AT5G22110 63.430 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1093g00014 K02325 - qsa:O6P43_008430 778.089