Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1093g00004 ATGATTACAATTACAGCAATAATTGTCTTCACTGTCTTGACGACACTTACTTTGACATGGTCATGGAGAATTCTGAACTGGTCATGGTTGAAGCCAAAGAAGCTAGAAAAGATTCTAAGAGAACAAGGACTTAAAGGGAATTCATATAGGTTTTTAGTTGGAGATATGAAAGATATTGTAAAGACGCGAAAAGAAGCAACATCTAAACCCATTAATCTTTCCGATGATATTGTTCCTCGTGTGTTTTCCTATTTCCAACAAAGTTCTATAAAACATGGGAAGAATTCTTTTGTTTGGTTGGGAGCAACACCAAGGGTAACCATCACAGATCCTGAGATAATTAAAGATGTATTTAACAAAAACAACGACTTTCAAAAGCTTAATATGAATCCGCTTGCCAGGTTACTAGTTAATGGTCTAGTAAACCTTGAGGGAGAACAGTGGAGCAAGCACAGAAAGATAATCAATCCTGCATTCCATTTTGAAAAACTGAAGATCATGTTACCAAATTTCTTAAAAAGTTGTGATGATCTGATTGGCAAATGGGAAACAATGTTGTCATCAGATGGATCATGTGAAGTGGACGTATGGCCGTTCCTTCAAAACTTGGCCAGTGATGCTATTTCACGAACAGCATTTGGAAGTAGTTATGAAGAAGGAATGAGAATATTTCAACTTCAAATCGAGCAAGCTGAACTTACGAAAACAGTTATGACGAATGTTTACATCCCTGGATGGAGGTTTCTACCAACTCCTACCCATAGGAGGATGAAGGAAATTGACAGAGATGTAAGAACTTCACTTACAAATATGATTAACAAGAGGGAGGAAGCACTGAAGGCAGGCGAAGCTACTAAGGATGATTTATTAGGTCTACTTTTGGAGTCAAATCACAAGAAAATGGAAGAACATGGCAACAATAAGAATGTCGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACCACTTCGGTTTTGCTTGTTTGGACAATGGTGTTGTTGAGTAGGTACCCTGATTGGCAAGCATGCGCACGGGAGGAAGTATTACAAGTTTTCGGTAACAATAAACCAGATTTTGATGGGCTAAGTCATCTTAAGATTGTCACCATGATTTTGAATGAGGTTCTTCGGTTATACCCTCCAGTAGTTGCGCTTCCTCGAACTGTTCACAAAGATATGAAACTTGGAAACCTAACATTACCTGCTGGAGTGCAAGTTTTCTTATCAATAGTTTTGGTTCACCATGATTCAGAACTATGGGGAGATGACGCCAATGTGTTCAATCCTGAAAGATTTTCGGAAGGTGTTTTGAAAGCAACAAATGGTAAACTTTCATTTTTTCCATTTGGAGGGGGTCCTAGAATTTGCATTGGACAAAACTTTGCCATGATAGAAGCAAAAATCGCAATTGCAATGATTTTGCAACTGTTCTCATTTGAACTTTCTCCAACCTATGCTCACGCCCCTACTGCGGTAATTACACTTAAGCCGCAATATGGTGCTCATATAATTCTTCATAAACTTGAAATATAA 1560 0.3821 MITITAIIVFTVLTTLTLTWSWRILNWSWLKPKKLEKILREQGLKGNSYRFLVGDMKDIVKTRKEATSKPINLSDDIVPRVFSYFQQSSIKHGKNSFVWLGATPRVTITDPEIIKDVFNKNNDFQKLNMNPLARLLVNGLVNLEGEQWSKHRKIINPAFHFEKLKIMLPNFLKSCDDLIGKWETMLSSDGSCEVDVWPFLQNLASDAISRTAFGSSYEEGMRIFQLQIEQAELTKTVMTNVYIPGWRFLPTPTHRRMKEIDRDVRTSLTNMINKREEALKAGEATKDDLLGLLLESNHKKMEEHGNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQACAREEVLQVFGNNKPDFDGLSHLKIVTMILNEVLRLYPPVVALPRTVHKDMKLGNLTLPAGVQVFLSIVLVHHDSELWGDDANVFNPERFSEGVLKATNGKLSFFPFGGGPRICIGQNFAMIEAKIAIAMILQLFSFELSPTYAHAPTAVITLKPQYGAHIILHKLEI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1093g00004 519 CDD CYP72 82 513 - -
Vivi1093g00004 519 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 Pfam Cytochrome P450 81 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 510 - -
Vivi1093g00004 519 SUPERFAMILY Cytochrome P450 79 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vivi1093g00004 519 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1093g00004 519 FunFam Cytochrome P450 734A1 29 518 - -
Vivi1093g00004 519 Gene3D Cytochrome P450 29 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1093g00004 20 517 Cytochrome P450 AT3G14610 59.800 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1093g00004 - - gmx:100777623 778.474