Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1086g00006 ATGGAGAATCATTCCAATTCGCGTCCCAATTCGCGTGATTCCTCACCTACCTCACGCGAATTGCTAGAGAACGATCACCGTTCATCGTTCGATGAACCACCACCTTCCAACACTAAGAGAGTCAAGCTCATCTGTAGCTTCGGTGGGAAAATTCAGCCTAGGCTTCACGACGGTCACTTTTCGTACATCGGAGGTGACACGAAAATCCTCGCCGTCGATCGTAATGTGAAATTATCACACCTTATTGGTAAGCTCAATGCCATGGCGGATTCTCATGTCTGTTTCAAGTATCAACTCCCTGGTGAAGATCTCGATGCTTTGATCTCGGTTTGCAATGAAGATGATCTCGATTATATGATGATCGAGTATGATCGGATGTGTCGCGCTTCACCTAAGCCTGCGAGGTTGAGGATTTTCCTCTTTCCTTCTCCGGTCAAGAACCACAGCAGCAATGCATCTTTCGATTCTATCAATTCCGCTATGAATCTTGCTGAGGATTCCAAATCGGAAGGCAAGTGGTTCGTAGATGCTCTCAATTCCGTTCATGTTCCGCCGTCGGAGGATTCTTCTCCACCTCCACCGCCGCCGACGATGAATCCTGATTATCTGTTTGGATTGGATAAACCGTATTCTCCGTCTCCCGAGGCAAAACAGGCGGAATTCCCGGAGTCTGTTCCGGATTTTGCGGCGAAGGATACGGAATGTGAGTCTGAGTCGGTTAGAGAAACCGAGATTCAGGAAATTCAGGTAATGCAGACTGTGAATGATGAACAGCAATTGAATTCTGATGGAGAAAACGGCGGAGTTAACGGCTCTGTTGGTTGTTACTCTCAGGAAAACACGGAAACGGAGACGCCGTTAGTTTCAACTGTACCTGTTCAAGCTGTGAGTGATGAACAGCAAATGAATTCTGACGAAGAAAAAGGCGGAGTTAACGGCTGTGTTGACAGTCACTCTCAGGTAAACACGGAAACTGAAATTCCGTTAGTTACTACTCCACCTGTTCAAGCTGTGAATGAAGAACAGCAAATGAATTCTGACGGAGAAAACGGCGGAGCTAACTGTTACACTCAGGAAAACACGGAAACGGAGATGCCGTTAGTTACAACTGAAATACCTGCTCAACCTCCGGCACCGGTTCATTCCGGTTCGGTTCAGTTTCTGCCTCCTGGACCGGCTTCGGTTCAGTCATCATTTTCTCCTATGATGCCGAATGTGGTTAGTCCTTACTCGACCGGATATCCAAATGAACCAATACCGGTTTATCTGATTCAAACAGCTTCTGGATTGTATCAAGCAGTGAGGCCAGTCATTGGACCTAACGGTCAACCGGTTTATTTCGCATATACTCAAATTGGGAATGAGTTTGGTTACAATGCATCAGGGCTACCTGGCATGGTTTCAGAGCGGGGCTATTCGAATGGTTCGTACAGGCAAGGTTTTCCATCTCAGGCGGCGGTTGCCGGTGTTGACAGCTGGAATTGA 1485 0.4727 MENHSNSRPNSRDSSPTSRELLENDHRSSFDEPPPSNTKRVKLICSFGGKIQPRLHDGHFSYIGGDTKILAVDRNVKLSHLIGKLNAMADSHVCFKYQLPGEDLDALISVCNEDDLDYMMIEYDRMCRASPKPARLRIFLFPSPVKNHSSNASFDSINSAMNLAEDSKSEGKWFVDALNSVHVPPSEDSSPPPPPPTMNPDYLFGLDKPYSPSPEAKQAEFPESVPDFAAKDTECESESVRETEIQEIQVMQTVNDEQQLNSDGENGGVNGSVGCYSQENTETETPLVSTVPVQAVSDEQQMNSDEEKGGVNGCVDSHSQVNTETEIPLVTTPPVQAVNEEQQMNSDGENGGANCYTQENTETEMPLVTTEIPAQPPAPVHSGSVQFLPPGPASVQSSFSPMMPNVVSPYSTGYPNEPIPVYLIQTASGLYQAVRPVIGPNGQPVYFAYTQIGNEFGYNASGLPGMVSERGYSNGSYRQGFPSQAAVAGVDSWN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1086g00006 494 MobiDBLite consensus disorder prediction 1 37 - -
Vivi1086g00006 494 SUPERFAMILY CAD & PB1 domains 56 150 - -
Vivi1086g00006 494 Gene3D - 61 142 - -
Vivi1086g00006 494 PANTHER OS05G0427100 PROTEIN-RELATED 9 371 - -
Vivi1086g00006 494 Pfam PB1 domain 58 142 IPR000270 GO:0005515
Vivi1086g00006 494 CDD PB1_UP2 44 141 - -
Vivi1086g00006 494 SMART PB1_new 55 143 IPR000270 GO:0005515
Vivi1086g00006 494 MobiDBLite consensus disorder prediction 18 33 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1086g00006 40 181 MAP Kinase Kinase Kinase AT5G57610 40.141 6.24e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1086g00006 - - psat:127118644 823.542