Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1085g00011 ATGGCCTCTCAGCAGATAACAGAAGAAGCTGTTTACCTTTGCACTGGAAATCTATTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAGAGCTTTAAAAGAATTAATGATATGAAAACAAGGAAAGGACTGGCCCTTGTTGATATTGTAAGAGAAGTGACAATGTTTGTATTTAAGATTAAGATACCTCCAGCTGTTCGAGTGCAATTGGTGAATGATTTGGCTGACATAGAAGTTATTAGGATCAAGGAGAGAAGGTTGAATTTCAGGGCCCCTAATATCTTAAATGAACAATTCGAGAAAGAGGGAAACCTAGAAAGACTATAA 348 0.3649 MASQQITEEAVYLCTGNLLPKDIEQISYWLLNEQYSESFKRINDMKTRKGLALVDIVREVTMFVFKIKIPPAVRVQLVNDLADIEVIRIKERRLNFRAPNILNEQFEKEGNLERL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1085g00011 115 SUPERFAMILY post-AAA+ oligomerization domain-like 20 86 IPR008921 GO:0003677|GO:0006260
Vivi1085g00011 115 Gene3D - 19 91 - -
Vivi1085g00011 115 FunFam Replication factor C subunit 5 18 90 - -
Vivi1085g00011 115 Pfam Replication factor C C-terminal domain 20 85 IPR013748 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1085g00011 3 85 Core DNA Replication Machinery Family AT1G77470 72.289 4.36e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1085g00011 K10756 - vvo:131639594 226.868